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Volume regulation in in situ human airway epithelial (calu‐3) cells: Focal Adhesion Kinase (FAK) and NKCC1

2013· article· en· W3167712073 on OpenAlexafffund
Amber L MacLellan, William S. Marshall

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldMedicine
TopicCystic Fibrosis Research Advances
Canadian institutionsSt. Francis Xavier University
FundersNatural Sciences and Engineering Research Council of CanadaNova Scotia Health Research Foundation
KeywordsBumetanideCotransporterChemistryFocal adhesionCell biologyIon transporterCystic fibrosis transmembrane conductance regulatorOsmotic concentrationTonicityBiophysicsMolecular biologyCellBiochemistryBiologySodiumMembrane

Abstract

fetched live from OpenAlex

Ion transport by FAK‐activated Na + ‐K + ‐2Cl − co‐transporter (NKCC1) and cystic fibrosis transmembrane conductance regulators (CFTR) is essential in cell regulatory volume responses in teleost epithelia (Marshall et al. 2005,2009). FAK‐related protein tyrosine kinase 2 (PYK2) activates CFTR in Calu‐3 cells (Liang et al. 2011), however, FAK regulation of NKCC or CFTR has not been investigated in a mammalian system. We aim to examine the possible role of FAK in regulating NKCC or CFTR ion‐transport during cell volume regulation in human airway (Calu‐3) cells. To model in vivo airway conditions, Calu‐3 cells were cultured into confluent monolayers on glass coverslips in minimal essential medium (MEM) at 37°C with 5% CO 2 /95% air. Cell volume regulation was examined using, 4–7 day‐old monolayers stained with BODIPY‐ceramide vital dye (1:1000 in isotonic MEM solution for 1hr) and mounted in a perfusion chamber. Monolayers were perfused with combinations of isotonic MEM 285 mOsm/kg (control), and NaCl‐equilibrated 360 mOsm/kg hypertonic MEM (hypersaline lung lavages use 3–7% NaCl aq ). Cell height (volume) changes were recorded over 1hr using XZt confocal micrographs. Hypertonic shock caused Calu‐3 cells shrinkage over 1–7 mins followed by regulatory volume increase (RVI) (contrasting previous reports) over 45‐mins (n=18 cells; 6 monolayers). To determine if NKCC1 or FAK‐facilitated ion transport facilitated RVI, monolayers were treated with NKCC1 inhibitor bumetanide and a FAK‐inhibitor TAE226. Inhibition of NKCC1 and FAK altered volume regulation patterns suggesting a critical mediation of airway cell volume regulation by NKCC1 and FAK. Funded by NSERC and NSHRF.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.281
Teacher spread0.265 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes2
Has abstractyes

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