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Molecular characteristics of BRAF mutated non-small cell lung cancer and therapeutic outcomes: Multi-institution study.

2021· article· en· W3168544199 on OpenAlexaffabout
Guillermo Martos, Aliyah Pabani, D. Gwyn Bebb, Amanda Williams Gibson, Michelle L. Dean, L. Petersen

Bibliographic record

VenueJournal of Clinical Oncology · 2021
Typearticle
Languageen
FieldMedicine
TopicLung Cancer Treatments and Mutations
Canadian institutionsUniversity of CalgaryUniversity of AlbertaBaker Hughes (Canada)
Fundersnot available
KeywordsMedicineTrametinibVemurafenibDabrafenibOncologyInternal medicineLung cancerKRASV600ECancerPopulationAdenocarcinomaMEK inhibitorCancer researchMutationKinaseColorectal cancerMAPK/ERK pathwayMetastatic melanoma

Abstract

fetched live from OpenAlex

e21029 Background: BRAF-mutations are uncommon, present in only 2-4% of all new non-small cell lung cancer (NSCLC) diagnoses. BRAF-mutation type has treatment implications, where the most common BRAFV600E shows sensitivity to tyrosine kinase inhibitors (Dabrafenib or Vemurafenib) with additional benefit seen in duel therapy adding MEK-inhibitors (Trametinib or Cobimetinib). Clinical responses have also been observed with immune checkpoint inhibitors in both V600E and non-V600E mutant patients. The optimal management strategy in this patient population is still unknown. Methods: Patients from the province of Alberta, Canada, with a BRAF-mutation and initiating systemic therapy between 2018 and 2020 were identified. Demographic, clinical, treatment and outcome data were extracted from the institutional Glans-Look Lung Cancer Database. Results: 31 patients with a BRAF-mutation were identified: 52% alive, 58% female, 87% ‘ever’ smokers (average: 40 pack-years). 70% ECOG > 2, 58% Stage IV at diagnosis, with the M1b (one extrathoracic metastatic site) being the most common. 87% had an adenocarcinoma histology and 64.5% carried the BRAFV600E mutation. 19% had other concurrent mutations (KRAS, PIK3CA or EGFR-L858R), 52% showed high PD-L1 expression ( > 50%). In addition, concurrent mutations also were associated with high PD-L1 positivity. 55% of the cohort received systemic treatment, with 71% still on treatment at the time of analysis. Conclusions: BRAF mutant NSCLC is associated with high PD-L1 expression and responses to both checkpoint inhibitors and BRAF inhibitor combinations. Treatment with immunotherapy appears to have a superior toxicity profile and prolonged disease control in both BRAF V600E and non-V600E mutant NSCLC and is an effective first-line strategy. Higher overall response rates are observed with BRAF inhibitor combinations in BRAF V600E patients. Further investigation is warranted to further elucidate sequencing strategies among specific subgroups.[Table: see text]

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.054
Threshold uncertainty score0.107

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.003
Science and technology studies0.0010.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.076
GPT teacher head0.489
Teacher spread0.414 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2021
Admission routes2
Has abstractyes

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