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Modulation of late apoptotic events by ammonia in glutaminedeprived mouse hybridoma cells

2013· article· en· W3169007005 on OpenAlexaffabout
Eric R. Gauthier, Abdelmuhsen Abusneina

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer, Hypoxia, and Metabolism
Canadian institutionsLaurentian University
Fundersnot available
KeywordsAzaserineApoptosisGlutamineDNA fragmentationFragmentation (computing)AmmoniumAmmonium chlorideChemistryGlutaminolysisBiochemistryBiologyProgrammed cell deathMolecular biologyAmino acid

Abstract

fetched live from OpenAlex

Highly proliferating cells reprogram their metabolism in order to fulfill their requirements in biosynthetic precursors. One consequence of this metabolic adaptation is glutamine (Gln) addiction, a phenomenon whereby cells become dependent on Gln for their survival. Using Sp2/0‐Ag14 (Sp2/0) hybridoma cells, we examined the effect of ammonium ions, a product of glutaminolysis, on the viability of Gln‐deprived cells. Supplementing Gln‐deprived Sp2/0 cells with 5 mM ammonium acetate (NH 4 + acetate) or 5 mM ammonium chloride (NH 4 + chloride) resulted in a significant increase in cell viability. Both ammonium salts also protected Sp2/0 cells treated with the toxic Gln analog azaserine. Supplementing Gln‐starved Sp2/0 cells with either ammonium salt did not alter cytosolic cytochrome c release or caspase‐3 activation, indicating that the mechanisms triggering the apoptotic machinery remained intact. Interestingly, a significant reduction in the number of cells with apoptotic nuclear condensation and fragmentation was observed. However, neither NH 4 + acetate nor NH 4 + chloride interfered with DNA fragmentation and nuclear lamin A/C cleavage, two key events observed in apoptotic nuclear condensation and fragmentation. All together, these data suggest that the pro‐survival effect of ammonium salts are linked with an inhibition of late apoptotic events. Funded by NSERC‐CANADA (to ERG).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.211
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes2
Has abstractyes

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