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Oxidative protein modification of soluble N‐ethylmaleimide‐sensitive factor attachment protein receptors

2013· article· en· W3169418833 on OpenAlexaff
Junfeng Wang, Hua Tan

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCellular transport and secretion
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsSNAP25SyntaxinSynaptobrevinChemistryNeurotransmissionCell biologySNARE complexMitochondrionSynaptic vesicleBiochemistryReceptorBiologyExocytosisVesicleSecretion

Abstract

fetched live from OpenAlex

Evidence suggests that bipolar disorder is a progressive disease with imbalanced neurotransmission. Recent studies indicated that mitochondrial dysfunction is associated with this disorder. Mitochondria are enriched in the synaptic terminals. Mitochondrial dysfunction is the major source for production of reactive oxygen species that may induce oxidative modification of synaptic proteins. Soluble N‐ethylmaleimide‐sensitive factor attachment protein receptors (SNAREs), including synaptosomal‐associated protein 25 (SNAP25), syntaxin and synaptobrevin, play critical roles in neurotransmission. Using immunoprecipitation followed by immunoblotting analysis, we found that hydroxyl radical increased carbonylation of SNAP25 and syntaxin in rat cerebral cortex. Using co‐immunoprecipitation, we found that hydroxyl radical decreased interaction between SNAP25 and syntaxin. In addition, we found that 4‐hydroxynonenal (4‐HNE), an end product of lipid peroxidation, can form protein adducts with SNAP25 in rat cerebral cortex. We also found that chronic treatment with mood stabilizing drug lithium inhibited 4‐HNE‐SNAP25 adduction. Since SNAP25, syntaxin and synaptobrevin form SNARE protein complex that plays a significant role in neurotransmitter release, our results suggest that oxidative modification of these proteins may contribute to imbalanced neurotransmission in bipolar disorder.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.000

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.243
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2013
Admission routes1
Has abstractyes

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