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Record W3169835580 · doi:10.1002/sam.11530

Penalized composite likelihood for colored graphical Gaussian models

2021· article· en· W3169835580 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueStatistical Analysis and Data Mining The ASA Data Science Journal · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGene expression and cancer classification
Canadian institutionsLunenfeld-Tanenbaum Research InstituteMount Sinai HospitalYork University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsGraphical modelComputer scienceGaussianAlgorithmMatrix (chemical analysis)EstimatorSelection (genetic algorithm)Model selectionColoredPattern recognition (psychology)Data miningMathematical optimizationArtificial intelligenceMathematicsStatistics

Abstract

fetched live from OpenAlex

Abstract This article proposes a penalized composite likelihood method for model selection in colored graphical Gaussian models. The method provides a sparse and symmetry‐constrained estimator of the precision matrix and thus conducts model selection and precision matrix estimation simultaneously. In particular, the method uses penalty terms to constrain the elements of the precision matrix, which enables us to transform the model selection problem into a constrained optimization problem. Further, computer experiments are conducted to illustrate the performance of the proposed new methodology. It is shown that the proposed method performs well in both the selection of nonzero elements in the precision matrix and the identification of symmetry structures in graphical models. The feasibility and potential clinical application of the proposed method are demonstrated on a microarray gene expression dataset.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.860
Threshold uncertainty score0.572

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0020.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.365
Teacher spread0.301 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it