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Regulation of Megalin membrane traffic by AMP‐activated protein kinase in kidney proximal tubule epithelial cells

2021· article· en· W3170239458 on OpenAlexaff
Nikol Leshchyshyn, Laura A. Orofiamma, Christian Delos Santos, Sadia Rahmani, Costin N. Antonescu

Bibliographic record

VenueThe FASEB Journal · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRenal and related cancers
Canadian institutionsToronto Metropolitan University
Fundersnot available
KeywordsClathrinCell biologyInternalizationEndocytosisChemistryReabsorptionLDL receptorReceptor-mediated endocytosisReceptorKidneyBiologyLipoproteinBiochemistryEndocrinologyCholesterol

Abstract

fetched live from OpenAlex

Megalin is a transmembrane receptor protein that belongs to a family of proteins known as low‐density lipoprotein receptors (LDLRs) that functions in reabsorption of various molecules from the urine in the proximal tubule epithelial cells (PTECs) of the kidney. Disruption of the regulation of Megalin is associated with various stages of renal disease. Megalin mediates reabsorption by functioning as a scavenger receptor: binding of molecules (cargo) within the kidney proximal tubule lumen to the ectodomain of Megalin followed by internalization of cargo‐bound Megalin via clathrin‐mediated endocytosis, the first stage in transcytosis of cargo molecules across the kidney epithelium. Kidney proximal tubule cells experience metabolic stress due to low oxygen availability. We have recently shown that metabolic stress resulting in activation of AMP‐activated protein kinase (AMPK) regulates the endocytosis of a large number of cell surface proteins, including that of beta1‐integrin, that has a similar requirement for dab2 for internalization as does Megalin. How AMPK may regulate Megalin internalization in kidney PTECs is not well understood. Megalin internalization occurs via recruitment of the receptor to clathrin‐coated pits (CCPs), which are ~100 nm structures comprised of clathrin and other proteins at the cell surface. Upon assembly and receptor recruitment, CCPs mediate membrane budding and eventually scission, leading to an internalized clathrin‐coated vesicle (CCV). Megalin recruitment to CCPs is mediated by the clathrin adaptor protein dab2 that binds to NPXY motif that is present on Megalin and other LDLR family proteins. Here, we examine how metabolic stress and AMPK regulate the formation of CCPs and the dab2‐dependent recruitment of Megalin and related receptors for internalization. Using cells engineered to express fluorescently tagged clathrin and other proteins, together with total internal reflection fluorescence microscopy and automated image analysis, we uncovered that AMPK activation triggers a reduction in the size and rate of initiation of CCPs, but an increased efficiency of formation of clathrin‐coated vesicles. In addition, AMPK activation resulted in a robust increase in the recruitment of dab2 to CCPs. We have complemented this approach with assays that monitor the cell surface membrane traffic of Megalin and related receptors such as integrins. Collectively, these studies reveal a novel signaling pathway that mediates the regulation of the clathrin internalization of several receptors by AMPK and metabolic stress. A better understanding of signals responsive to cell metabolism and metabolic stress in kidney PTECs and how these lead to remodeling of endocytic membrane traffic may reveal novel ways to treat certain forms of kidney diseases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.213
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2021
Admission routes1
Has abstractyes

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