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Record W3170706338 · doi:10.5194/egusphere-egu21-10391

Patterns of postglacial vegetation establishment clarified by lacustrine sedaDNA from Baffin Island, Arctic Canada

2021· article· en· W3170706338 on OpenAlexaffabout
Sarah E. Crump, Matthew Power, Bianca Fréchette, G. de Wet, Martha K. Raynolds, Jonathan H. Raberg, Morten E. Allentoft, Michael Bunce, Gifford H. Miller

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldEnvironmental Science
TopicEnvironmental DNA in Biodiversity Studies
Canadian institutionsUniversité du Québec à Montréal
Fundersnot available
KeywordsHoloceneTundraPollenDeglaciationVegetation (pathology)GeologyArcticEcologyBeringiaPhysical geographyColonizationOceanographyGeographyBiology

Abstract

fetched live from OpenAlex

The colonization of recently deglaciated landscapes by tundra vegetation during the early Holocene is an important case study for understanding possible rates and patterns of plant migration in a rapidly warming world. Fossil pollen in lake sediment has traditionally served as the primary tool for reconstructing paleovegetation and understanding postglacial biogeography. However, because pollen can be wind-transported long distances and, in some cases, reworked from older deposits on the landscape, pollen-based vegetation histories can sometimes obscure the true history of plant colonization. In contrast, lacustrine sedimentary ancient DNA (sedaDNA) is sourced locally and is less likely to be adequately preserved through reworking events, thus making it a more reliable proxy for determining the precise timing of plant colonization. Here, we present three sedaDNA records from Holocene lake sediment across southern Baffin Island, Arctic Canada, that clarify the timing of postglacial vegetation changes. In particular, DNA from the subarctic shrub Betula (dwarf birch) first appears thousands of years after deglaciation in all three lake catchments, suggesting delayed colonization despite its strong pollen signal in early postglacial sediments. While moderate levels of Alnus (alder) pollen characterize early to mid-Holocene lake sediments from the region, sedaDNA suggests that Alnus was likely not present in any of the three lake catchments during the Holocene. In addition, aquatic plant community changes indicated by sedaDNA faithfully reflect the timing of early Holocene warmth in the region, highlighting the potential utility of aquatic plant DNA as a qualitative temperature proxy. We suggest that ancient plant DNA in lake sediment provides key paleoecological information that is distinct from traditional proxy records, particularly during periods of relatively rapid ecological change like the early Holocene.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.028
Threshold uncertainty score0.064

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0030.003
Science and technology studies0.0030.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.174
Teacher spread0.168 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2021
Admission routes2
Has abstractyes

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