MétaCan
Menu
Back to cohort
Record W3173359813 · doi:10.1128/mra.00360-21

Draft Genome Sequence of <i>Arthrobacter</i> sp. Strain 260, Isolated from a Uranium Tailings Management Facility in Northern Saskatchewan, Canada

2021· article· en· W3173359813 on OpenAlexafffundabout
Alexander Grigorʼyan, Viorica F. Bondici, Yuriy Kryachko, Nurul H. Khan, John R. Lawrence, Sanjit Singh, Gideon Wolfaardt, Niradha Withana Gamage, Deeksha Shetty, Darren R. Korber

Bibliographic record

VenueMicrobiology Resource Announcements · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Phylogenetic Studies
Canadian institutionsEnvironment and Climate Change CanadaLallemand (Canada)Toronto Metropolitan UniversityCanadian Light Source (Canada)University of Saskatchewan
FundersNatural Sciences and Engineering Research Council of CanadaGovernment of CanadaCameco
KeywordsTailingsWhole genome sequencingStrain (injury)ArthrobacterBioremediationGenomeSequence (biology)BiologyMicrobiologyGeneGeneticsChemistryBacteria

Abstract

fetched live from OpenAlex

sp. strain 260, which was isolated from a uranium tailings management facility, is reported. The sequence may help determine the bioremediation potential of this strain and facilitate further research aimed at a better understanding of the hypertolerance of this genus to extreme conditions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.562
Threshold uncertainty score0.871

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0030.006
Science and technology studies0.0020.000
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0060.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.197
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2021
Admission routes3
Has abstractyes

Explore more

Same venueMicrobiology Resource AnnouncementsSame topicGenomics and Phylogenetic StudiesFrench-language works237,207