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Record W3173472261 · doi:10.1101/2021.06.08.447489

Brain charts for the human lifespan

2021· preprint· en· W3173472261 on OpenAlexaff
Richard A. I. Bethlehem, Jakob Seidlitz, Simon R. White, Jacob W. Vogel, Karen Anderson, Chris Adamson, Sophie Adler, George S. Alexopoulos, Evdokia Anagnostou, Ariosky Areces-González, Duncan E. Astle, Bonnie Auyeung, Gareth Ball, Simon Baron‐Cohen, Richard Beare, Saashi A. Bedford, Vivek Benegal, Frauke Beyer, Ji-Hyun Bae, John Blangero, Manuel Blesa, James P. Boardman, Matthew Borzage, Niall Bourke, Vince D. Calhoun, M. Mallar Chakravarty, Chen Chen, Casey Chertavian, Gaël Chételat, Yap Seng Chong, James I. Cole, Aiden Corvin, Manuela Costantino, Fabrice Crivello, Vanessa Cropley, Jennifer Crosbie, Nicolás Crossley, Marion Delarue, Richard Delorme, Sylvane Desrivières, Gabriel A. Devenyi, Raymond J. Dolan, Kirsten A. Donald, Gary Donohoe, Katharine Dunlop, A. David Edwards, Jed T. Elison, Cameron T. Ellis, Jeremy A. Elman, Lisa T. Eyler, Damien A. Fair, Eric Feczko, Paul C. Fletcher, Peter Fonagy, Carol E. Franz, Lídice Galán‐Garcia, Gholipour Sajjad, Jay N. Giedd, John H. Gilmore, David C. Glahn, Ian Goodyer, P.E. Grant, Nynke A. Groenewold, Faith M. Gunning, Raquel E. Gur, R. C. Gur, Christopher Hammill, Oskar Hansson, Trey Hedden, Andreas Heinz, Richard N. Henson, Katja Heuer, Jacqueline Hoare, Bharath Holla, Avram J. Holmes, Rosemary Holt, Hao Huang, Kiho Im, Jonathan Ipser, Clifford R. Jack, Andrea Parolin Jackowski, Tianye Jia, D. T. Jones, René S. Kahn, Hasse Karlsson, Linnea Karlsson Wirebring, Ryuta Kawashima, Elizabeth W. Kelley, Silke Kern, Ki Woong Kim, Manfred G. Kitzbichler, William S. Kremen, François Lalonde, Brigitte Landeau, Seonjoo Lee, Jason P. Lerch, John D. Lewis, Wei Liao, Conor Liston, Michael Lombardo, Jinglei Lv, Charles J. Lynch, Travis T. Mallard, Machteld Marcelis, Ross D. Markello, Samuel R. Mathias, Bernard Mazoyer, Philip McGuire, Michael J. Meaney, Andrea Mechelli, N. Medic, Sarah E. Morgan, David Mothersill, J. Nigg, Marcus K.H. Ong, Cynthia M. Ortinau, Rik Ossenkoppele, Minhui Ouyang, Lena Palaniyappan, Léo Paly, Pedro Mário Pan, Christos Pantelis, MinTae Park, Tomáš Paus, Zdenka Pausová, Deirel Paz-Linares, Alexa Pichet Binette, Karen Pierce, Qian‐Xing Zhuang, J. Qiu, Anqi Qiu, Armin Raznahan, Timothy Rittman, Amanda Rodrigue, Caitlin K. Rollins, Rafael Romero-García, Lisa Ronan, Monica D. Rosenberg, David H. Rowitch, Giovanni Abrahão Salum, Theodore D. Satterthwaite, H. Lina Schaare, Russell Schachar, Aaron P. Schultz, Günter Schumann, Michael Schöll, Russell T. Shinohara, Ingmar Skoog, Christopher D. Smyser, Reisa A. Sperling, Dan J. Stein, Aleks Stolicyn, John Suckling, Gemma Sullivan, Yasuyuki Taki, Benjamin Thyreau, Roberto Toro, Nicolas Traut, Kamen A. Tsvetanov, Nicholas B. Turk‐Browne, Jetro J. Tuulari, Christophe Tzourio, Étienne Vachon‐Presseau, Mitchell Valdés-Sosa, Pedro A. Valdés‐Sosa, S. L. Valk, Thérèse van Amelsvoort, Simon Vandekar, Lana Vasung, L.W. Victoria, Sylvia Villeneuve, Arno Villringer, Petra E. Vértes, Konrad Wagstyl, Y.S. Wang, Simon K. Warfield, Varun Warrier, Eric Westman, Margaret L. Westwater, Heather C. Whalley, A. Veronica Witte, N. Yang, B.T. Thomas Yeo, Hyuk Jin Yun, Andrew Zalesky, Heather J. Zar, Anna Zettergren, Juan Zhou, Hisham Ziauddeen, André Zugman, Xi‐Nian Zuo

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2021
Typepreprint
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsMcGill University Health CentreUniversité de MontréalWestern UniversityCentre Hospitalier Universitaire Sainte-JustineQueen's UniversityDouglas Mental Health University InstituteMcGill UniversityHospital for Sick ChildrenUniversity of TorontoMontreal Neurological Institute and HospitalHolland Bloorview Kids Rehabilitation Hospital
FundersNational Institute of Mental HealthMedical Research CouncilNational Institute for Health and Care ResearchNational Institutes of HealthBritish AcademyUK Research and InnovationBiotechnology and Biological Sciences Research CouncilDepartment of Health and Social CareNIHR Cambridge Biomedical Research CentreWellcome Trust
KeywordsNeuroimagingBrain morphometryBrain sizeNormativePsychologySample size determinationMagnetic resonance imagingMedicineNeuroscienceStatisticsRadiology

Abstract

fetched live from OpenAlex

Abstract Over the past few decades, neuroimaging has become a ubiquitous tool in basic research and clinical studies of the human brain. However, no reference standards currently exist to quantify individual differences in neuroimaging metrics over time, in contrast to growth charts for anthropometric traits such as height and weight 1 . Here, we built an interactive resource to benchmark brain morphology, www.brainchart.io , derived from any current or future sample of magnetic resonance imaging (MRI) data. With the goal of basing these reference charts on the largest and most inclusive dataset available, we aggregated 123,984 MRI scans from 101,457 participants aged from 115 days post-conception through 100 postnatal years, across more than 100 primary research studies. Cerebrum tissue volumes and other global or regional MRI metrics were quantified by centile scores, relative to non-linear trajectories 2 of brain structural changes, and rates of change, over the lifespan. Brain charts identified previously unreported neurodevelopmental milestones 3 ; showed high stability of individual centile scores over longitudinal assessments; and demonstrated robustness to technical and methodological differences between primary studies. Centile scores showed increased heritability compared to non-centiled MRI phenotypes, and provided a standardised measure of atypical brain structure that revealed patterns of neuroanatomical variation across neurological and psychiatric disorders. In sum, brain charts are an essential first step towards robust quantification of individual deviations from normative trajectories in multiple, commonly-used neuroimaging phenotypes. Our collaborative study proves the principle that brain charts are achievable on a global scale over the entire lifespan, and applicable to analysis of diverse developmental and clinical effects on human brain structure. Furthermore, we provide open resources to support future advances towards adoption of brain charts as standards for quantitative benchmarking of typical or atypical brain MRI scans.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.016
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Meta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.108
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.016
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.043
GPT teacher head0.261
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations35
Published2021
Admission routes1
Has abstractyes

Explore more

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