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PERK phosphorylation on tyrosine 561 delays ER stress‐induced PERK activation

2012· article· en· W3173583822 on OpenAlexafffundabout
Lama Yamani, Mathieu Latreille, Louise Larose

Bibliographic record

VenueThe FASEB Journal · 2012
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsMcGill University
FundersCanadian Diabetes Association
KeywordsUnfolded protein responsePhosphorylationEndoplasmic reticulumKinaseProtein kinase ACell biologyTyrosine phosphorylationTyrosine kinaseProtein kinase RProtein kinase domainChemistryBiologySignal transductionMitogen-activated protein kinase kinaseBiochemistryGene

Abstract

fetched live from OpenAlex

The PKR‐like endoplasmic reticulum (ER) kinase (PERK) is an ER transmembrane ser/thr protein kinase that plays an essential role in mediating the unfolded protein response (UPR) activated during stress conditions in the ER lumen. The importance of PERK in pancreatic beta‐cell homeostasis is demonstrated in Wolcott‐ Rallison syndrome, a neonatal or early infancy form of insulin‐dependent diabetes in humans with inactivating mutations in the PERK gene. In this study, we provide strong evidence that PERK is phosphorylated on tyrosine 561 (Y561) in pervanadate‐treated MIN6 cells, a mouse pancreatic beta cell line in culture. In addition, we demonstrate that increased phosphorylation of PERK on Y561 delays PERK activation in response to pharmacological agents that induce ER stress. Interestingly, we discovered that the adaptor protein Nck1 directly interacts with PERK phosphorylated on Y561 through its SH2 domain. Finally, using recombinant wild‐type and kinase dead PERK proteins, our data strongly suggest that PERK phosphorylation on Y561 is dependent on PERK kinase activity. All together, our results indicate that PERK phosphorylation on Y561 and binding to Nck1 play an important role in regulating PERK activity. Supported by the Canadian Diabetes Association.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.270
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes3
Has abstractyes

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