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PDE6s are heterogeneously distributed in native endothelium of mesenteric arteries from mice

2012· article· en· W3173862605 on OpenAlexafffund
Alexandre Blanchette, Fanny Toussaint, Chimène Charbel, Philippe Comtois, Jonathan Ledoux

Bibliographic record

VenueThe FASEB Journal · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPhosphodiesterase function and regulation
Canadian institutionsUniversité de MontréalMontreal Heart Institute
FundersNatural Sciences and Engineering Research Council of CanadaHeart and Stroke Foundation of Canada
KeywordsCell biologyIntracellularEndotheliumEndothelial stem cellPhosphodiesteraseChemistryBiologyConfocal microscopyCyclic nucleotideNucleotideBiochemistryEndocrinologyIn vitro

Abstract

fetched live from OpenAlex

Cyclic nucleotides (cGMP, cAMP) being key components of cellular pathways, their local levels are the core of important regulatory mechanisms. Although endothelium is the foremost vascular producer of NO, regulatory mechanisms of the NO/cGMP remain to be determined in endothelial cells. Polarity of native endothelial cells also suggests potential cyclic nucleotides microdomains. cGMP‐specific phosphodiesterases, PDE5 and PDE9, have previously been identified in endothelial cells. However, both active isoforms of retina‐restricted PDE6 (α & β) appear to be expressed in native endothelial cells as well. In opposition to PDE5 which is homogeneously distributed in endothelial cells, both PDE6s appear to be localized at the nuclear membrane interface as evidenced by confocal microscopy. However, α isoform is sparsely distributed while β forms a continuous perinuclear ring. Interestingly, PDE6s could not be detected in cultured endothelial cell lines. Dynamic mathematical modeling revealed that the experimental intracellular distributions of PDE6s and PDE5 have a significant impact on local cGMP levels, especially in the perinuclear region where cGMP levels are reduced significantly in response to a pulse of NO. Combined experimental and modeling results suggest that PDE6 might have a significant impact on cGMP‐dependent endothelial function in native arteries. Supported by FRSQ, NSERC and HSFC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.018

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0020.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.232
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes2
Has abstractyes

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