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Modulation of Calu‐3 Anion Channels by H1N1 Infection

2012· article· en· W3174076234 on OpenAlexafffund
Taryn Waugh, John C.H. Ching, Anthony P. Carr, Hugh G.G. Townsend, Matthew E. Loewen

Bibliographic record

VenueThe FASEB Journal · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon channel regulation and function
Canadian institutionsUniversity of Saskatchewan
FundersCummings FoundationNatural Sciences and Engineering Research Council of CanadaSaskatchewan Health Research FoundationCon Alma Health Foundation
KeywordsIon channelCytokineRespiratory epitheliumInfluenza A virusBarrier functionRespiratory systemImmunologyEpitheliumIon transporterUssing chamberVirusChemistryBiologyMedicineCell biologyInternal medicineMembranePathologyReceptorBiochemistry

Abstract

fetched live from OpenAlex

Influenza virus A infection leads to pulmonary edema through a disruption of the fluid balance in the lungs. Part of this balance is maintained by the regulation of the anion channels in the respiratory epithelium lining the airway. Upon influenza infection this respiratory epithelium produces cytokines that aid in fighting the infection starting around 6 hours. These same cytokines by themselves have been shown to alter anion channel function. In this study, using the Calu‐3 respiratory epithelial cell line, we measure cytokine production by real time quantitative RT‐PCR as well as anion channel function as short‐circuit current produced by a Calu‐3 monolayer in a Ussing Chamber. Viral protein production was shown along with an increase in pro‐inflammatory cytokines at 24 hours post infection. Interestingly, no change in short‐circuit current response was found at 24 hours. A change in short‐circuit current response was first noted at 48 hours post infection. This change in short‐circuit current seems to be a direct effect on anion channel conductance and not a decrease in tissue viability as the resistance of the Calu‐3 monolayer did not significantly change. This study is the first step in understanding the pathophysiology which drives fluid into the lungs during an influenza A infection. This study was supported by SHRF, EHRF, CAHF, CFI and NSERC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.247
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes2
Has abstractyes

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