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Record W3174314242 · doi:10.1096/fasebj.20.4.a389-a

AMP‐activated protein kinase‐regulated activation of the PGC‐1α promoter in skeletal muscle cells

2006· article· en· W3174314242 on OpenAlexafffund
Isabella Irrcher, Angie F. Kirwan, David A. Hood

Bibliographic record

VenueThe FASEB Journal · 2006
Typearticle
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsYork University
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health Research
KeywordsAMPKMolecular biologyCell biologySkeletal muscleMitochondrial biogenesisChemistryPromoterBiologyProtein kinase AKinaseGene expressionGeneMitochondrionBiochemistryEndocrinology

Abstract

fetched live from OpenAlex

PGC‐1α is an important regulator of mitochondrial biogenesis in skeletal muscle. However, the transcriptional mechanisms controlling PGC‐1α expression in muscle remain to be clearly defined. We have isolated the proximal 2kb sequence of the PGC‐1α promoter from human genomic DNA. Analysis reveals that it contains putative binding sites for Sp1, ATF2/CREB, FKHR, GATA, SRF, MEF2, p53 and NF‐κB as well as multiple E Boxes. Using truncated deletions of the PGC‐1α promoter, we investigated the effect of AMPK activation by AICAR, a known mitochondrial biogenesis‐stimulating agent. AICAR treatment (1mM, 24hrs) increased promoter activity within the 848bp fragment of the PGC‐1α promoter activity by 3.4‐fold (p<0.001) in C 2 C 12 muscle cells. This occurred concomitantly with 1.8‐ (p<0.05) and 2.2‐fold (p<0.05) increases in GATA‐EBox DNA‐binding and PGC‐1α mRNA expression, respectively. The AICAR effect, which is mediated via overlapping GATA/EBox binding sites, requires the cooperative actions of GATA‐4 and USF‐1. GATA‐4 overexpression increased PGC‐1α promoter activity 3.2‐fold (p<0.05), and was further enhanced by 1.4‐fold in the presence of AICAR. Our data define a novel pathway by which AMPK activation regulates PGC‐1α promoter activity via GATA‐4 and USF‐1, ultimately resulting in the induction of PGC‐1α mRNA expression. They also suggest that the modulation of the AMPK signaling pathway via GATA‐4 and/or USF‐1 could represent a potential therapeutic target to control PGC‐1α expression in skeletal muscle. This work was funded by NSERC and CIHR.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.239
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2006
Admission routes2
Has abstractyes

Explore more

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