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Expression and functional characterization of murine organic anion transporting polypeptide 1b2 (oatp1b2/oatp4/lst‐1)

2008· article· en· W3175012406 on OpenAlexaff
Henriette E. Meyer zu Schwabedissen, Joseph A. Ware, Rommel G. Tirona, Richard B. Kim

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldMedicine
TopicDrug Transport and Resistance Mechanisms
Canadian institutionsWestern University
Fundersnot available
KeywordsOrganic anion-transporting polypeptideOrganic anion transporter 1Western blotTransporterBiologyTaurocholic acidMolecular biologyMessenger RNANorthern blotBiochemistryChemistryBile acidGene

Abstract

fetched live from OpenAlex

The organic anion transporting polypeptide family plays important roles in mediating the cellular uptake of endogenous and exogenous compounds. Human liver enriched transporters such as OATP1B1 and OATP1B3 have been widely studied and shown to be involved in hepatic uptake and disposition of hormones, bile acids, and drugs. However, little is known about the murine orthologue, oatp1b2. Accordingly, expression of mouse oatp1b2 was assessed using real‐time PCR and Western blot analysis. mRNA transcripts were detected in a number of tissues including kidney, skeletal muscle, stomach and heart, with highest level in mouse liver. Immunohistochemical detection revealed localization of oatp1b2 in the sinusoidal membrane of hepatocytes. In contrast to the mRNA data, oatp1b2 protein expression was not detected in other tissues but liver. Cloning of the full coding region of oatp1b2 revealed the presence of two new splice variants. Interestingly, these variants were significantly expressed in the organs noted previously, but much less in liver. Heterologous expression experiments revealed taurocholic acid, estrone‐3‐sulfate, estradiol‐17β‐glucuronide, pravastatin and cerivastatin as substrates of the transporter. These findings give insights to species related differences in OATP transporter function that has application to mouse models of hepatic drug disposition.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.211
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

Explore more

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