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Record W3175369700 · doi:10.1111/jvs.13050

Benchmarking plant diversity of Palaearctic grasslands and other open habitats

2021· article· en· W3175369700 on OpenAlexaff
Idoia Biurrun, Remigiusz Pielech, Iwona Dembicz, François Gillet, Łukasz Kozub, Corrado Marcenò, Triin Reitalu, Koenraad Van Meerbeek, Riccardo Guarino, Milan Chytrý, Robin J. Pakeman, Zdenka Preislerová, Irena Axmanová, Sabina Burrascano, Sándor Bartha, Steffen Boch, Hans Henrik Bruun, Timo Conradi, Pieter De Frenne, Franz Essl, Goffredo Filibeck, Michal Hájek, Borja Jiménez‐Alfaro, Анна Куземко, Zsolt Molnár, Meelis Pärtel, Ricarda Pätsch, Honor C. Prentice, Jan Roleček, Laura Sutcliffe, Massimo Terzi, Manuela Winkler, Jianshuang Wu, Svetlana Aćić, Alicia Teresa Rosario Acosta, Elías Afif Khouri, Munemitsu Akasaka, Juha M. Alatalo, Michele Aleffi, Alla Aleksanyan, Arshad Ali, Iva Apostolova, Parvaneh Ashouri, Zoltán Bátori, Esther Baumann, Thomas Becker, Elena Belonovskaya, José Luis Benito Alonso, Asun Berastegi, Ariel Bergamini, Kuber P. Bhatta, Ilaria Bonini, Marc-Olivier Büchler, Vasyl Budzhak, Álvaro Bueno, Fabrizio Buldrini, Juan Antonio Campos, Laura Cancellieri, Marta Carboni, Tobias Ceulemans, Alessandro Chiarucci, Cristina Chocarro, Luisa Conti, Anna Mária Csergő, Beata Cykowska‐Marzencka, Marta Czarniecka‐Wiera, Marta Czarnocka‐Cieciura, Patryk Czortek, Jiří Danihelka, Francesco de Bello, Balázs Déak, László Demeter, Lei Deng, Martin Diekmann, Jiří Doležal, Christian Dolnik, Pavel Dřevojan, Cecilia Duprè, Klaus Ecker, Hamid Ejtehadi, Brigitta Erschbamer, Javier Etayo, Jonathan Etzold, Tünde Farkas, Mohammad Farzam, George Fayvush, María Rosa Fernández Calzado, Manfred Finckh, Wendy Fjellstad, Georgios Fotiadis, Daniel García‐Magro, Itziar García‐Mijangos, Rosario G. Gavilán, Markus S. Germany, Sahar Ghafari, Gianpietro Giusso del Galdo, John‐Arvid Grytnes, Behlül Güler, Alba Gutiérrez‐Girón, Aveliina Helm, Mercedes Herrera, Elisabeth Hüllbusch, Nele Ingerpuu, Annika K. Jägerbrand, Ute Jandt, Monika Janišová, Philippe Jeanneret, Florian Jeltsch, Kai Jensen, Anke Jentsch, Zygmunt Kącki, Kaoru Kakinuma, Jutta Kapfer, Mansoureh Kargar, András Kelemen, Kathrin Kiehl, Philipp Kirschner, Asuka Koyama, Nancy Langer, Lorenzo Lazzaro, Jan Lepš, Ching‐Feng Li, Frank Yonghong Li, Diego Liendo, Regina Lindborg, Swantje Löbel, Ângela Lomba, Zdeňka Lososová, Pavel Lustyk, Arántzazu L. Luzuriaga, Wenhong Ma, Simona Maccherini, Martin Magnes, Marek Malicki, Michael Manthey, Constantin Mardari, Felix May, Helmut Mayrhofer, Eliane S. Meier, Farshid Memariani, Kristina Merunková, Ottar Michelsen, Joaquı́n Molero Mesa, Halime Moradi, Ivan Moysiyenko, Michele Mugnai, Alireza Naqinezhad, Rayna Natcheva, Josep M. Ninot, Marcin Nobis, Jalil Noroozi, Arkadiusz Nowak, V. G. Onipchenko, Salza Palpurina, Harald Pauli, Hristo Pedashenko, Christian Pedersen, Robert K. Peet, Aaron Pérez‐Haase, Jan Peters, Nataša Pipenbaher, Chrisoula Pirini, Eulàlia Pladevall‐Izard, Zuzana Plesková, Giovanna Potenza, Soroor Rahmanian, Maria Pilar Rodríguez‐Rojo, Vladimir Ronkin, Leonardo Rosati, Eszter Ruprecht, Solvita Rūsiņa, Marko Sabovljević, Anvar Sanaei, Ana M. Sánchez, Francesco Santi, Galina Savchenko, Maria‐Teresa Sebastià, Dariia Shyriaieva, Vasco Silva, Sonja Škornik, Eva Šmerdová, Judit Sonkoly, Marta Gaia Sperandii, Monika Staniaszek‐Kik, Carly Stevens, Simon Stifter, Sigrid Suchrow, Grzegorz Swacha, Sebastian Świerszcz, Amir Talebi, Balázs Teleki, Lubomír Tichý, Csaba Tölgyesi, Marta Torca, Péter Török, N. G. Tsarevskaya, Ioannis Tsiripidis, Ingrid Turisová, Atushi Ushimaru, Orsolya Valkó, Carmen Van Mechelen, Thomas Vanneste, Iuliia Vasheniak, Kiril Vassilev, Daniele Viciani, Luis Villar, Risto Virtanen, Ivana Vitasović Kosić, András Vojtkó, Denys Vynokurov, Emelie Waldén, Wang Yun, Frank Weiser, Lu Wen, Karsten Wesche, Hannah J. White, Stefan Widmer, Sebastian Wolfrum, Anna Wróbel, Zuoqiang Yuan, David Zelený, Liqing Zhao, Jürgen Dengler

Bibliographic record

VenueJournal of Vegetation Science · 2021
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsEcologyBenchmarkingHabitatGeographyPlant diversityDiversity (politics)BiodiversityBiology

Abstract

fetched live from OpenAlex

Abstract Aims Understanding fine‐grain diversity patterns across large spatial extents is fundamental for macroecological research and biodiversity conservation. Using the GrassPlot database, we provide benchmarks of fine‐grain richness values of Palaearctic open habitats for vascular plants, bryophytes, lichens and complete vegetation (i.e., the sum of the former three groups). Location Palaearctic biogeographic realm. Methods We used 126,524 plots of eight standard grain sizes from the GrassPlot database: 0.0001, 0.001, 0.01, 0.1, 1, 10, 100 and 1,000 m2 and calculated the mean richness and standard deviations, as well as maximum, minimum, median, and first and third quartiles for each combination of grain size, taxonomic group, biome, region, vegetation type and phytosociological class. Results Patterns of plant diversity in vegetation types and biomes differ across grain sizes and taxonomic groups. Overall, secondary (mostly semi‐natural) grasslands and natural grasslands are the richest vegetation type. The open‐access file ”GrassPlot Diversity Benchmarks” and the web tool “GrassPlot Diversity Explorer” are now available online ( https://edgg.org/databases/GrasslandDiversityExplorer ) and provide more insights into species richness patterns in the Palaearctic open habitats. Conclusions The GrassPlot Diversity Benchmarks provide high‐quality data on species richness in open habitat types across the Palaearctic. These benchmark data can be used in vegetation ecology, macroecology, biodiversity conservation and data quality checking. While the amount of data in the underlying GrassPlot database and their spatial coverage are smaller than in other extensive vegetation‐plot databases, species recordings in GrassPlot are on average more complete, making it a valuable complementary data source in macroecology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.003
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.281
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations89
Published2021
Admission routes1
Has abstractyes

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