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The spectrin cytoskeleton is an integral target and crucial component of adherent, invasive triggering and invasive zippering bacterial diseases

2011· article· en· W3176106415 on OpenAlexafffund
Tyson Joel Ruetz, Steve Cornick, Julian A. Guttman

Bibliographic record

VenueThe FASEB Journal · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEscherichia coli research studies
Canadian institutionsSimon Fraser University
FundersCanadian Institutes of Health Research
KeywordsSpectrinCytoskeletonListeria monocytogenesCell biologyBiologyActinActin cytoskeletonCytoplasmCellGeneticsBacteria

Abstract

fetched live from OpenAlex

Entropathogenic Escherichia coli (EPEC), Salmonella Typhimurium ( S. Typhimurium), and Listeria monocytogenes ( L. monocytogenes ) all manipulate the host cell cytoskeleton at crucial stages of their disease processes. Although the actin cytoskeleton has been previously identified as a ubiquitous target of these pathogens, the examination of the spectrin cytoskeleton has been largely overlooked. Here we show that spectrin and the spectrin‐associated proteins adducin and protein 4.1 are recruited to sites of EPEC pedestals as well as sites of S . Typhimurium and L. monocytogenes invasion. Individual siRNA knockdowns of each spectrin cytoskeletal protein significantly impeded the ability of EPEC to form pedestals and inhibited the abilities of both S .Typhimurium and L.monocytogenes to invade host cells. Further studies identified spectrin cytoskeleton recruitment to later time‐points of S .Typhimurium and L. monocytogenes infections during the intercellular stage of pathogenesis, revealing novel cytoplasmic roles for the spectrin cytoskeleton. This work demonstrates that the spectrin cytoskeletal system is crucial for bacterial pathogenesis and represents a potential target for therapeutic treatment for a broad list of infections. Grant Funding Source : CIHR

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.259
Teacher spread0.231 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes2
Has abstractyes

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