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Neuropilin‐1 is a receptor for latent and active TGFβ‐1and is involved in suppression by regulatory T cells

2008· article· en· W3176235435 on OpenAlexaff
Yelena Glinka, Gérald J. Prud’homme

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAngiogenesis and VEGF in Cancer
Canadian institutionsUniversity of TorontoSt. Michael's Hospital
Fundersnot available
KeywordsNeuropilin 1Transforming growth factorSemaphorinReceptorChemistryCell biologyBiologyCancer researchVascular endothelial growth factorBiochemistryVEGF receptors

Abstract

fetched live from OpenAlex

Neuropilin‐1 (Nrp1) is a receptor for the class 3 semaphorins and vascular endothelial growth factor (VEGF). It is also a marker of regulatory T cells (Tr), which often carry both Nrp1 and latency‐associated peptide‐TGFβ‐1. The signaling TGFβ‐1 receptors bind only active TGFβ‐1, and we hypothesized that Nrp1 binds the latent form. Indeed, we found that Nrp1 is a high affinity receptor for both latent and active TGFβ‐1. Free LAP and LAP‐TGFβ‐1 competed with VEGF165 for binding to Nrp1. LAP has a basic, arginine‐rich C‐terminal motif similar to VEGF and peptides, which bind to the b1 domain of Nrp1. A C‐terminal LAP peptide (QSSRHRR) bound to Nrp1 and inhibited the binding of VEGF and LAP‐TGFβ‐1. Compared to Nrp1‐ cells, sorted Nrp1+ T cells had a much greater capacity to capture LAP‐TGFβ‐1. Sorted Nrp1‐ T cells captured soluble Nrp1‐Fc, and this increased their ability to capture LAP‐TGFβ‐1. Conventional CD4+CD25‐Nrp1‐ T cells double‐coated with Nrp1‐Fc/LAP‐TGFβ‐1 acquired strong Tr activity. Moreover, LAP‐TGFβ‐1 was activated by Nrp1‐Fc, and also by a peptide of the b2 domain of Nrp1 (RKFK; similar to a thrombospondin‐1 KRFK peptide, which is involved in LAP‐TGFβ‐1 activation). Nrp1 also activated LAP‐TGFβ‐1 in cell‐free system. Thus, Nrp1 is a receptor for latent and active TGFβ‐1, and can contribute to Tr activity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.018
GPT teacher head0.243
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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