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Record W3177221158 · doi:10.82308/4276

Chromatin dynamics of cold-stress responses in Cannabis sativa L.

2015· article· en· W3177221158 on OpenAlexaboutno aff
Boris F. Mayer

Bibliographic record

VenueeScholarship@McGill (McGill) · 2015
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicSeed and Plant Biochemistry
Canadian institutionsnot available
Fundersnot available
KeywordsCannabis sativaChromatinStress (linguistics)Dynamics (music)BiologyGeneticsPsychologyBotanyDNAPhilosophy

Abstract

fetched live from OpenAlex

Although Cannabis sativa L. has been grown for millennia as a multipurpose crop, little is known about its freezing tolerance and capacity to cold acclimate. Plants native to temperate regions are able to increase their cold hardiness when exposed to low temperatures through a process called cold acclimation. These organisms developed different strategies to deal with cold, and may involve alterations of the photosynthesis apparatus, the accumulation of carbohydrates and the production of protective molecules. Such strategies often start with the induction of cold-regulated genes (COR genes) notably via changes in chromatin structure. This thesis focuses on the cold acclimation capacity and freezing tolerance of hemp and uncovers underlying epigenetic and molecular mechanisms. The first objective consisted in ranking nine Cannabis sativa L. varieties approved for production in Canada according to their cold acclimation capacity and freezing tolerance. A whole-plant freezing test revealed a range of phenotypic variations for these traits, which enabled us to classify nine Cannabis sativa L. varieties into three groups. The first group holds varieties that acclimate the most efficiently, the second group includes varieties with modest cold acclimation capacities while the third group comprises sensitive varieties that do not acclimate. However, further analysis indicated that all varieties displayed similar cold-response strategies regarding photosynthesis and the accumulation of soluble sugars. In the second objective, we identified COR genes in the genome of Cannabis sativa L. and by monitoring their expression levels, we uncovered that all varieties could induce the expression of COR genes in response to cold. However, the varieties that could cold acclimate the most efficiently accumulated COR transcripts to higher levels. In the third objective, we observed that all varieties modified their epigenome in response to cold with however a distinction that the most successful varieties displayed more pronounced global DNA methylation dynamics and a wider range of variations of cytosine methylation and histone modifications at COR gene loci. Altogether, this study is the first to report the cold acclimation and freezing tolerance capacities of Cannabis sativa L. characterised at the physiological, metabolic and molecular levels. Findings from this study may serve as stepping-stones for the sustainable development of Cannabis culture in Canada and other northern countries.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.037
Threshold uncertainty score0.504

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.219
Teacher spread0.195 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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