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Inflammasome Activation Triggered by the Cysteine Proteases of <i>Entamoeba histolytica</i>

2012· article· en· W3177325799 on OpenAlexafffund
Leanne Mortimer, France Moreau, Kris Chadee

Bibliographic record

VenueThe FASEB Journal · 2012
Typearticle
Languageen
FieldMedicine
TopicAmoebic Infections and Treatments
Canadian institutionsUniversity of Calgary
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsInflammasomeEntamoeba histolyticaCaspase 1Innate immune systemCysteine proteaseProteasesCaspaseCell biologyBiologyCysteineMicrobiologyChemistryInflammationImmunologyReceptorBiochemistryApoptosisProgrammed cell deathEnzyme

Abstract

fetched live from OpenAlex

Entamoeba histolytica ( Eh ) is an enteric dwelling parasite that invades the epithelial barrier and instigates devastating diseases, collectively called amebiasis. A fundamental question of Eh ‐host interactions is how the parasite activates host defenses. Inflammasomes are a family of cytosolic sensors that form in response to infectious or cellular injury and trigger innate responses by activating caspase‐1, which in turn regulates cleavage and activation of potent pro‐inflammatory cytokines, such as IL‐1β and IL‐18. We hypothesized an inflammasome is involved in innate detection of Eh. THP‐1 macrophages were stimulated with live Eh and Western blotting and ELISA were used to detect caspase‐1 and IL‐1β activation. Eh activated the NLRP3 inflammasome in a dose‐ and time‐dependent manner: inhibition of K+ efflux, reactive oxygen species and caspase‐1 with specific inhibitor YVAD, abrogated inflammasome activation. We identified Eh cysteine protease 5 as the microbial ligand that triggered the inflammasome through PI3KIγ‐dependent signaling. This is the first pathogen cysteine protease shown to activate the NLRP3 inflammasome. This work was funded by NSERC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.255
Teacher spread0.239 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes2
Has abstractyes

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