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Record W3177975583 · doi:10.1136/sextrans-2021-sti.60

O02.5 Secreted Proteolytic Activity of Bacterial Vaginosis-Associated Bacteria

2021· article· en· W3177975583 on OpenAlexaff
Karen Lithgow, Vienna Buchholz, Shaelen Konschuh, Laura K. Sycuro

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldImmunology and Microbiology
TopicReproductive tract infections research
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsProteasesMicrobiologyPorphyromonas gingivalisPrevotellaBiologyProteaseGardnerella vaginalisBacterial vaginosisBiochemistryBacteriaEnzyme

Abstract

fetched live from OpenAlex

Bacterial vaginosis (BV) is a prevalent dysbiotic vaginal condition associated with increased risk for acquisition/transmission of sexually transmitted infections (STIs). While the microbes present in women with BV are highly variable, functional features such as increased catabolism of peptides/amino acids are relatively conserved. To date, the bacterial proteases initiating this process and identity of host protein targets remain undefined. We hypothesized that broad-acting proteases are secreted by BV-associated bacteria and modulate host factors relevant to STI acquisition. Bacterial suspensions and cell-free supernatants from select BV-associated species were evaluated for proteolytic activity using the universal protease substrate, casein, in agar plates and fluorometric assays. Degradation of collagen was explored using zymography or fluorophore-conjugated collagen with or without inhibitors. Fibrinogen/thrombin degradation was explored through clot inhibition assays and protein gel electrophoresis. Our investigations reveal that BV-associated bacteria including Prevotella amnii, Prevotella bivia, Porphyromonas asaccharolytica, Porphyromonas uenonis, Sneathia amnii, Sneathia sanguinegens, Gardnerella vaginalis, and Gardnerella piotti produce secreted proteases with broad substrate specificity. However, only select species degrade specific host protein polymers, namely collagen. Further investigation of Porphyromonas enzymes revealed that metallo- and cysteine proteases coordinate broad activity. Both species secrete three collagenases, which were fully abrogated by metalloprotease inhibitors in P. uenonis, but not P. asaccharolytica. Finally, both species degrade fibrinogen and thrombin to abrogate blood clotting. These studies reveal proteolytic activity is conserved among numerous vaginal bacteria with important roles in BV pathogenesis. However, modulation of specific host targets is more variable. Vaginal Prevotella and Porphyromonas species increase risk of HIV acquisition and our findings show Porphyromonas species exhibit proteolytic activities through diverse and redundant enzymes. These activities could induce barrier disruption and microhemmorrhage in the cervicovaginal niche, thereby increasing the risk of STI acquisition. Further characterization of secreted proteases and their targets could identify new therapeutics for BV and STIs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.279
Teacher spread0.257 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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