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Record W3183880759 · doi:10.1643/i2020112

A New Cryptic Species of Polymixia (Teleostei, Acanthomorpha, Polymixiiformes, Polymixiidae) Revealed by Molecules and Morphology

2021· article· en· W3183880759 on OpenAlexaff
Terry Grande, Mark V. H. Wilson

Bibliographic record

VenueIchthyology & Herpetology · 2021
Typearticle
Languageen
FieldEnvironmental Science
TopicIchthyology and Marine Biology
Canadian institutionsUniversity of Alberta
FundersAcademy of Natural Sciences of Drexel UniversityFlorida Museum of Natural HistoryNova Southeastern UniversityField Museum
KeywordsTeleosteiMorphology (biology)Species complexEvolutionary biologyZoologyBiologyFisheryGeneticsFish <Actinopterygii>GenePhylogenetic tree

Abstract

fetched live from OpenAlex

A new and previously cryptic fish species, Polymixia hollisterae, new species, proposed common name “Bermuda Beardfish,” is described from two voucher specimens collected in 1997 at a depth of about 280 fm or 512 m on the NW slope of the Bermuda Platform, and a third voucher collected by a midwater trawl in the north-central Gulf of Mexico. The species belongs to the paracanthopterygian acanthomorph genus Polymixia, family Polymixiidae, order Polymixiiformes, and is named after pioneering ichthyologist, ocean explorer, and conservationist Gloria E. Hollister (Anable). It is distinguished from all other species in the genus by its greater dorsal and anal fin heights (19% and 14% of SL, respectively), its extremely long pectoral and pelvic fins (22% and 14% of SL, respectively), its relatively large eye diameter (34% of total head length), and its morphologically distinctive first anal-fin radial. It has a unique pigmentation pattern on the dorsal, anal, and caudal fins consisting of narrow, dark black patches near the tips of the longest few soft dorsal- and anal-fin rays, and a caudal-fin margin with a dark black fringe covering the distal fourth of the fin. Based on an earlier molecular study that revealed it to be a cryptic species, P. hollisterae, new species, is closely related to P. japonica, but it differs by 20–33 nucleotides in a total alignment of 4,983 nuclear and mitochondrial sites. The new species shares a distinctive scale morphology with P. japonica and P. nobilis (the type species); an intermediate number of dorsal-fin rays (V,31–32), like P. japonica (V,31–34); a distinctive preopercle shape with P. japonica, P. lowei, and P. berndti; and a low number of pyloric caeca with P. lowei and P. berndti. Pored lateral-line scales number 35, an intermediate number compared to reported counts of other species (31–39). The three supraneurals are sigmoid-shaped like those of P. nobilis, while dorsal-fin proximal radials interfinger with neural spines in a unique pattern. Body shape, as studied with measurement proportions and multivariate morphometrics, is distinguished by a relatively large head, large eyes, long jaws, and a more streamlined pre-dorsal body profile than its congeners. Further research and additional collecting will be needed to ascertain the geographic distribution and conservation status of the new species.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0010.001
Scholarly communication0.0000.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.209
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2021
Admission routes1
Has abstractyes

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