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Analysis of cough sound measurements including COVID-19 positive cases: A machine learning characterization

2021· article· en· W3184774590 on OpenAlex
Julio J. Valdés, Pengcheng Xi, Madison Cohen-McFarlane, Bruce Wallace, Rafik Goubran, Frank Knoefel

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldEngineering
TopicAdvanced Chemical Sensor Technologies
Canadian institutionsCarleton UniversityNational Research Council Canada
FundersNational Research Council
KeywordsComputer scienceArtificial intelligenceContext (archaeology)Machine learningPattern recognition (psychology)PreprocessorSupport vector machineDynamic time warping

Abstract

fetched live from OpenAlex

Remote monitoring and measurement are valuable tools for medical applications and they are particularly important in the context of pandemic outbreaks, like the current COVID-19. This paper presents an analysis of sound measurements of cough events from the point of view of their predictive content with respect to identification of different types of cough, including positive COVID-19 cases. The data consisted of a collection of audio samples collected from different sources including dry, wet, whooping and COVID-19 coughs. Unsupervised and supervised machine learning techniques were used to reveal the underlying structure of the data, described by dissimilarity spaces constructed from pair-wise dynamic time warping measures derived from the original sound measurements. Intrinsic dimensionality, nonlinear mappings to low-dimensional spaces and visual cluster assessment techniques allowed a representation of the cough types distribution. Supervised classification techniques were used to obtain models identifying cough classes and high performance classifiers were obtained for most of them, including COVID-19. These results are preliminary and there is potential to improve, as they were obtained directly from a small dataset, without signal preprocessing (trimming, filtering, etc.), hyperparameter tuning, ensemble models, and class imbalance handling approaches.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.153
Threshold uncertainty score0.467

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.062
GPT teacher head0.300
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Quick stats

Citations15
Published2021
Admission routes1
Has abstractyes

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