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Record W3186467883 · doi:10.1016/j.nicl.2021.102765

Artificial intelligence for classification of temporal lobe epilepsy with ROI-level MRI data: A worldwide ENIGMA-Epilepsy study

2021· article· en· W3186467883 on OpenAlexafffund
Ezequiel Gleichgerrcht, Brent C. Munsell, Saud Alhusaini, Marina K. M. Alvim, Núria Bargalló, Benjamin Bender, Andrea Bernasconi, Neda Bernasconi, Boris C. Bernhardt, Karen Blackmon, Maria Eugenia Caligiuri, Fernando Cendes, Luis Concha, Patricia Desmond, Orrin Devinsky, Colin P. Doherty, Martin Domín, John S. Duncan, Niels K. Focke, Antonio Gambardella, Bo Gong, Renzo Guerrini, Sean N. Hatton, Reetta Kälviäinen, Simon S. Keller, Peter Kochunov, Raviteja Kotikalapudi, Barbara A. K. Kreilkamp, Angelo Labate, Sönke Langner, Sara Larivière, Matteo Lenge, Elaine Lui, Pascal Martin, Mario Mascalchi, Stefano Meletti, Terence J. O’Brien, Heath Pardoe, José C. Pariente, Jun Rao, Mark P. Richardson, Raúl Rodríguez‐Cruces, Theodor Rüber, Ben Sinclair, Hamid Soltanian‐Zadeh, Dan J. Stein, Pasquale Striano, Peter N. Taylor, Rhys H. Thomas, Anna Elisabetta Vaudano, Lucy Vivash, Felix von Podewills, Sjoerd B. Vos, Bernd Weber, Yi Yao, Clarissa Lin Yasuda, Junsong Zhang, Paul M. Thompson, Sanjay M. Sisodiya, Carrie R. McDonald, Leonardo Bonilha, André Altmann, Chantal Depondt, Marian Galovic, Sophia I. Thomopoulos, Roland Wiest

Bibliographic record

VenueNeuroImage Clinical · 2021
Typearticle
Languageen
FieldMedicine
TopicEpilepsy research and treatment
Canadian institutionsBC Children's HospitalMcGill UniversityMontreal Neurological Institute and Hospital
FundersNational Institute of Neurological Disorders and StrokeMedical Research CouncilFonds de Recherche du Québec - SantéNatural Sciences and Engineering Research Council of CanadaCentre Azrieli de recherche sur l'autisme, Institut et Hôpital Neurologiques de MontréalEberhard Karls Universität TübingenUniversity College London Hospitals NHS Foundation TrustMinistero dell’Istruzione, dell’Università e della RicercaHospital for Sick ChildrenEpilepsy Research UKMinistero della SaluteConsejo Nacional de Ciencia y TecnologíaMedical Research Council Centre for Neurodevelopmental DisordersConselho Nacional de Desenvolvimento Científico e TecnológicoNational Natural Science Foundation of ChinaNational Institute of Mental HealthNational Institute on Handicapped ResearchSaastamoisen säätiöNational Health and Medical Research CouncilFundação de Amparo à Pesquisa do Estado de São PauloNational Institutes of HealthSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungNational Institute for Health and Care ResearchDirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de MéxicoDeutsche ForschungsgemeinschaftFinding A Cure for Epilepsy and SeizuresCitizens United for Research in EpilepsyNational Institute of Biomedical Imaging and BioengineeringCanadian Institutes of Health ResearchEpilepsy SocietyNational Science Foundation
KeywordsTemporal lobeEpilepsyHippocampal sclerosisMagnetic resonance imagingArtificial intelligenceDiffusion MRINeuroimagingHippocampal formationMedicineComputer sciencePsychologyRadiologyNeuroscience

Abstract

fetched live from OpenAlex

Artificial intelligence has recently gained popularity across different medical fields to aid in the detection of diseases based on pathology samples or medical imaging findings. Brain magnetic resonance imaging (MRI) is a key assessment tool for patients with temporal lobe epilepsy (TLE). The role of machine learning and artificial intelligence to increase detection of brain abnormalities in TLE remains inconclusive. We used support vector machine (SV) and deep learning (DL) models based on region of interest (ROI-based) structural (n = 336) and diffusion (n = 863) brain MRI data from patients with TLE with ("lesional") and without ("non-lesional") radiographic features suggestive of underlying hippocampal sclerosis from the multinational (multi-center) ENIGMA-Epilepsy consortium. Our data showed that models to identify TLE performed better or similar (68-75%) compared to models to lateralize the side of TLE (56-73%, except structural-based) based on diffusion data with the opposite pattern seen for structural data (67-75% to diagnose vs. 83% to lateralize). In other aspects, structural and diffusion-based models showed similar classification accuracies. Our classification models for patients with hippocampal sclerosis were more accurate (68-76%) than models that stratified non-lesional patients (53-62%). Overall, SV and DL models performed similarly with several instances in which SV mildly outperformed DL. We discuss the relative performance of these models with ROI-level data and the implications for future applications of machine learning and artificial intelligence in epilepsy care.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.011
metaresearch head score (Gemma)0.028
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.059

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0110.028
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0000.001
Scholarly communication0.0020.002
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.332
GPT teacher head0.465
Teacher spread0.133 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations77
Published2021
Admission routes2
Has abstractyes

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