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Record W3192560419

Identification of QTL Involved in Low-temperature Tolerance at The Germination Stage by Recombination Inbred Lines in Rice

2020· article· en· W3192560419 on OpenAlexvenueno aff
Suobing Zhang, Yunhui Zhang, Jing Lin, Haiyuan Chen, Yingjie Wang, Xiaomei Zhu, Chun-Feng Song, Xianwen Fang

Bibliographic record

VenueRice Genomics and Genetics · 2020
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicRice Cultivation and Yield Improvement
Canadian institutionsnot available
Fundersnot available
KeywordsQuantitative trait locusJaponicaBiologyInbred strainJaponica riceMarker-assisted selectionPopulationGerminationSelection (genetic algorithm)Molecular markerLocus (genetics)GeneticsAgronomyGeneBotanyMedicine
DOInot available

Abstract

fetched live from OpenAlex

Low-temperature germination (LTG) resistance of direct-seeded rice (DSR) seeds can overcome the developmental delay caused by low-temperature stress and ensure the vigorous growth of seedlings. The LTG is complex quantitative trait controlled by QTL s and has low genetic force, which leads to low efficiency of the direct selection of the trait by breeders. The research on QTL mapping for LTG in rice is helpful to carry out molecular marker-assisted selection (MAS) and improve the efficiency of selection for LTG in DSR breeding. In this study, the LTG rate showed extremely significant differences between the high-quality japonica rice variety Nanjing 46 in Jiangsu and the local variety Zhaxima in Yunnan. The QTL mapping was carried out by a recombination inbred line population (RIL) derived from a cross between Zhaxima and the Nanjing46. Total three QTL s ( qLTG-2 , qLTG-4 and qLTG-7 ) involved in LTG were detected on chromosome 2, 4 and 7, respectively. They accounted for 7.69%, 8.75% and 22.93% of the total phenotypic variation (PV), respectively. Interestingly, there was no reported QTL involved in LTG in the candidate region of qLTG-2 , which exhibited that the qLTG-2 was a novel QTL locus. The QTL s detected in this study will provide new genetic material and molecular markers for improving the low-temperature tolerance at germination stage in rice by molecular marker assisted selection breeding.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.222
Teacher spread0.205 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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