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SepUnet: Depthwise Separable Convolution Integrated U-Net For MRI Reconstruction

2021· article· en· W3193289316 on OpenAlexaff
Soheil Zabihi, Elahe Rahimian, Amir Asif, Arash Mohammadi

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicAdvanced MRI Techniques and Applications
Canadian institutionsConcordia University
Fundersnot available
KeywordsComputer scienceUnavailabilityDeep learningArtificial intelligenceRendering (computer graphics)Convolution (computer science)Deep neural networksLatency (audio)Iterative reconstructionArtificial neural networkMachine learningComputer engineering

Abstract

fetched live from OpenAlex

Accelerating Magnetic Resonance Imaging (MRI) acquisition process is a critical and challenging medical imaging problem as basic reconstructions obtained from the undersampled k-space often exhibit blur or aliasing effects. Despite its significance and recent advancements in the field of deep neural networks (DNNs), development of deep learning-based MRI reconstruction algorithms is not yet flourished due to unavailability of public and large datasets. The recently introduced large-scale fastMRI dataset is posed to change this state of affairs, however, existing DNN solutions developed based on fastMRI require learning a large number of parameters rendering their practical application limited due to the strict low-latency requirements of real-time MRI acquisition. In this paper, we aim to address this drawback and target reducing the computational cost associated with single-coil reconstruction task. More specifically, the paper proposes a novel deep model referred to as the SepUnet architecture achieving significant reduction in the required number of parameters while maintaining high accuracy. Performance of the proposed SepUnet architecture is evaluated based on the official test dataset from fastMRI illustrating accuracy improvement in comparison to its published counterparts while requiring significantly reduced number of trainable parameters (i.e., the SepUnet architecture is much faster and lighter than its counterparts).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.322
Teacher spread0.302 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations9
Published2021
Admission routes1
Has abstractyes

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