MétaCan
Menu
← Back to cohort
Record W3200391361 · doi:10.14288/1.0394245

Identification of natural compounds to quench quorum sensing in Campylobacter jejuni for the reduction of biofilm formation

2021· article· en· W3200391361 on OpenAlexaff
Shenmiao Li

Bibliographic record

VenuecIRcle (University of British Columbia) · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacterial biofilms and quorum sensing
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsCampylobacter jejuniBiofilmQuorum sensingMicrobiologyIdentification (biology)Reduction (mathematics)CampylobacterChemistryBiologyBacteriaEcologyMathematicsGenetics

Abstract

fetched live from OpenAlex

Quorum sensing is a process of bacterial intercellular communication that relies on the production and perception of chemical signals called autoinducers. Via quorum sensing, bacteria can modulate a range of behaviours in response to the change of population density for better fitness. Quorum sensing mediated biofilm formation is a vital survival strategy for many bacteria. At a high population density, bacteria can aggregate and attach to a surface by producing and secreting extracellular polymeric substances (EPS). The surrounding EPS protects the encased cells from the unfavourable conditions. Campylobacter jejuni is a major bacterial cause of human diarrhoeal diseases worldwide. Despite its sensitivity to environmental stresses, C. jejuni ubiquitously distributes throughout the poultry production chain. Autoinducer-2 (AI-2) mediated biofilm formation is known to be critical to the environmental survival of C. jejuni. C. jejuni possesses LuxS, the enzyme involved in the production of AI-2. In this dissertation, two natural fatty acids, namely decanoic acid and lauric acid, were identified as AI-2 inhibitors of C. jejuni. Decanoic acid and lauric acid at 100 ppm inhibited ~90% AI-2 activity of C. jejuni without inactivation of the bacterial cells. Anti-biofilm effect of decanoic acid and lauric acid was investigated. C. jejuni culture was incubated with or without the treatment by fatty acids for 72 h. Biofilm biomass was determined by crystal violet assay, and the numbers of viable planktonic and biofilm-associated cells were separately determined by the conventional plating assay. Except one C. jejuni strain increased biofilm biomass at the treatment groups, the fatty acids reduced 10-50% of the biofilm biomass in the other strains. Lauric acid at 100 ppm achieved ~3-log and ~2-log reduction of C. jejuni biofilm-associated and planktonic cells, respectively. In addition, both fatty acids effectively reduced C. jejuni motility. This study identified the AI-2 inhibitors of C. jejuni and investigated their inhibitory effect on biofilm formation and motility. The findings of this study can aid in the development of alternative C. jejuni control strategies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.191
Teacher spread0.184 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

Explore more

Same venuecIRcle (University of British Columbia)→Same topicBacterial biofilms and quorum sensing→French-language works237,207→