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Record W3202548429 · doi:10.26434/chemrxiv.14477691.v1

Machine Learning as a Tool to Engineer Microstructures: Morphological Prediction of Tannin-Based Colloids Using Bayesian Surrogate Models

2021· preprint· en· W3202548429 on OpenAlexaff
Soo-Ah Jin, Tero Kämäräinen, Patrick Rinke, Orlando J. Rojas, Milica Todorović

Bibliographic record

VenueChemRxiv · 2021
Typepreprint
Languageen
FieldEnvironmental Science
TopicSoil Geostatistics and Mapping
Canadian institutionsUniversity of British Columbia
FundersEuropean Research CouncilAustralian Institute for Musculoskeletal ScienceAcademy of FinlandEuropean CommissionFinnish Center for Artificial IntelligenceAalto-Yliopisto
KeywordsColloidBiological systemComputer scienceColloidal particleNanotechnologyAdhesionArtificial intelligenceTannic acidMaterials scienceSurrogate modelSuspension (topology)Biochemical engineeringMachine learningMathematicsChemistryChemical engineeringEngineeringBiology

Abstract

fetched live from OpenAlex

Oxidized tannic acid (OTA) is a useful biomolecule with a strong tendency to form complexes with metals and proteins. In this study we open the possibility to further the application of OTA when assembled as supramolecular systems, which typically exhibit functions that correlate with shape and associated morphological features. We use artificial intelligence (AI) to selectively engineer OTA into particles encompassing 1-dimensional (1D) to 3-dimensional (3D) constructs. We employed Bayesian regression to correlate colloidal suspension conditions (pH and p K a ) with the size and shape of the assembled colloidal particles. Fewer than 20 experiments were found to be sufficient to build surrogate model landscapes of OTA morphology in the experimental design space, which were chemically interpretable and endowed predictive power on data. We produced multiple property landscapes from the experimental data, helping us to infer solutions that would satisfy, simultaneously, multiple design objectives. The balance between data efficiency and the depth of information delivered by AI approaches testify to their potential to engineer particles, opening new prospects in the emerging field of particle morphogenesis, impacting bioactivity, adhesion, interfacial stabilization and other functions inherent to OTA.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.236
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2021
Admission routes1
Has abstractyes

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