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Record W3204799586 · doi:10.1101/2021.09.30.462145

Why can we detect lianas from space?

2021· preprint· en· W3204799586 on OpenAlexaff
Marco D. Visser, Matteo Detto, Félicien Meunier, Jin Wu, Jane R. Foster, David C. Marvin, Peter M. van Bodegom, Boris Bongalov, Matheus Henrique Nunes, David A. Coomes, Hans Verbeeck, J. Antonio Guzmán Q., Arturo Sánchez‐Azofeifa, Chris J. Chandler, Geertje van der Heijden, Doreen S. Boyd, Giles M. Foody, Mark Cutler, Eben N. Broadbent, Shawn Serbin, Stefan A. Schnitzer, M. Elizabeth Rodríguez‐Ronderos, Frank J. Sterck, José A. Medina‐Vega, S. W. Pacala

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2021
Typepreprint
Languageen
FieldEnvironmental Science
TopicRemote Sensing in Agriculture
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsLianaCanopyRemote sensingScale (ratio)Spectral signatureEnvironmental scienceBiologyEcologyGeographyCartography

Abstract

fetched live from OpenAlex

Abstract Lianas, woody vines acting as structural parasites of trees, have profound effects on the composition and structure of tropical forests, impacting tree growth, mortality, and forest succession. Remote sensing offers a powerful tool for quantifying the scale of liana infestation, provided the availability of robust detection methods. We analyze the consistency and global specificity of spectral signals from liana-infested tree crowns and forest stands, examining the underlying mechanisms. We compiled a database, including leaf reflectance spectra from 5424 leaves, fine-scale airborne reflectance data from 999 liana-infested canopies, and coarse-scale satellite reflectance data covering hectares of liana-infested forest stands. To unravel the mechanisms of the liana spectral signal, we applied mechanistic radiative transfer models across scales, corroborated by field data on liana leaf chemistry and canopy structure. We find a consistent liana spectral signature at canopy and stand scales across sites. This signature mainly arises at the canopy level due to direct effects of leaf angles, resulting in a larger apparent leaf area, and indirect effects from increased light scattering in the NIR and SWIR regions, linked to lianas’ less costly leaf construction compared to trees. The existence of a consistent global spectral signal for lianas suggests that large-scale quantification of liana infestation is feasible. However, because the traits identified are not exclusive to lianas, accurate large-scale detection requires rigorously validated remote sensing methods. Our models highlight challenges in automated detection, such as potential misidentification due to leaf phenology, tree life-history, topography, and climate, especially where the scale of liana infestation is less than a single remote sensing pixel. The observed cross-site patterns also prompt ecological questions about lianas’ adaptive similarities across environments, indicating possible convergent evolution due to shared constraints on leaf biochemical and structural traits. Open data statement Of the 17 datasets used, 10 are published and publicly accessible, with links provided in this submission (Appendix S1: Section S1). Upon acceptance, remaining seven datasets will be provided via Smithsonian’s Dspace. The open-source model code is available as R-package ccrtm ( https://cran.r-project.org/web/packages/ccrtm/index.html ) and on github ( https://github.com/MarcoDVisser/ccrtm ). Code will be archived in Zenodo should the manuscript be accepted for publication

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.010
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.010
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.002
Scholarly communication0.0040.006
Open science0.0010.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.185
Teacher spread0.176 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2021
Admission routes1
Has abstractyes

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