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Record W3207775241 · doi:10.1038/s41598-021-99481-9

Multinational characterization of neurological phenotypes in patients hospitalized with COVID-19

2021· article· en· W3207775241 on OpenAlexaff
Trang T. Le, Alba Gutiérrez‐Sacristán, Jiyeon Son, Chuan Hong, Andrew M. South, Brett K. Beaulieu-Jones, Ne Hooi Will Loh, Yuan Luo, Michele Morris, Kee Yuan Ngiam, Lav P. Patel, Malarkodi Jebathilagam Samayamuthu, Emily Schriver, Amelia L.M. Tan, Jason H. Moore, Tianxi Cai, Gilbert S. Omenn, Paul Avillach, Isaac S. Kohane, James R. Aaron, Giuseppe Agapito, Adem Albayrak, M Alessiani, Danilo F. Amendola, François Angoulvant, Li L. L. J. Anthony, Bruce J. Aronow, Andrew M. Atz, James Balshi, Douglas S. Bell, Antonio Bellasi, Riccardo Bellazzi, Vincent Benoît, Michele Beraghi, José Luis Bernal Sobrino, Mélodie Bernaux, Romain Bey, Alvar Blanco Martínez, Clara-Lea Bonzel, John Booth, Silvano Bosari, Florence T. Bourgeois, Robert L. Bradford, Gabriel A. Brat, Stéphane Bréant, Nicholas W. Brown, William Bryant, Mauro Bucalo, Anita Burgun, Mario Cannataro, Aldo Carmona, Charlotte Caucheteux, Julien Champ, Krista Chen, Jin Chen, Luca Chiovato, Lorenzo Chiudinelli, James J. Cimino, Tiago K. Colicchio, Sylvie Cormont, Sébastien Cossin, Jean B. Craig, Juan Luis Cruz-Bermúdez, Jaime Cruz‐Rojo, Arianna Dagliati, Mohamad Daniar, Christel Daniel, Anahita Davoudi, Batsal Devkota, Julien Dubiel, Loïc Estève, Shirley Fan, Robert W Follett, Paula S. Azevedo, Thomas Ganslandt, Noelia García Barrio, Lana X. Garmire, Nils Gehlenborg, Alon Geva, Tobias Gradinger, Alexandre Gramfort, Romain Griffier, Nicolas Griffon, Olivier Grisel, David A. Hanauer, Christian Haverkamp, Bing He, Darren W. Henderson, Martin Hilka, John H. Holmes, Petar Horki, Kenneth M. Huling, Meghan R. Hutch, Richard Issitt, Anne‐Sophie Jannot, Vianney Jouhet, Ramakanth Kavuluru, Mark S. Keller, Katie Kirchoff, Jeffrey G. Klann, Ian D. Krantz, Detlef Kraska, Ashok Krishnamurthy, Sehi L’Yi, Judith Leblanc, Andressa R. R. Leite, Guillaume Lemaitre, Leslie Lenert, Damien Leprovost, Molei Liu, Sarah Lozano-Zahonero, Kristine E. Lynch, Sadiqa Mahmood, Sarah Maidlow, Adeline C. Makoudjou Tchendjou, Alberto Malovini, Kenneth D. Mandl, Chengsheng Mao, Anupama Maram, Patricia Martel, Aaron J. Masino, Michael E. Matheny, Thomas Maulhardt, Maria Mazzitelli, Michael McDuffie, Arthur Mensch, Fatima Ashraf, Marianna Milano, Marcos F. Minicucci, Bertrand Moal, Cinta Moraleda, Jeffrey S. Morris, Karyn Moshal, Sajad Mousavi, Douglas A. Murad, Shawn N. Murphy, Thomas P. Naughton, Antoine Neuraz, James B. Norman, Jihad Obeid, Marina Politi Okoshi, Karen L. Olson, Nina Orlova, Brian D. Ostasiewski, Nathan Palmer, Nicolas Paris, Miguel Pedrera‐Jiménez, Emily Pfaff, Danielle Pillion, Hans U. Prokosch, Robson Prudente, Víctor Quirós González, Rachel Ramoni, Maryna Raskin, Siegbert Rieg, Gustavo Roig Domínguez, Pablo Rojo, Carlos Sáez, Elisa Salamanca, Arnaud Sandrin, Janaina C.C. Santos, Juergen Schuettler, Luigia Scudeller, Neil J. Sebire, Pablo Serrano Balazote, Patricia Serre, Arnaud Serret-Larmande, Zahra Shakeri, Domenick Silvio, Piotr Sliz, Charles Sonday, Anastassia Spiridou, Bryce W. Q. Tan, Byorn W. L. Tan, Suzana Érico Tanni, Deanne M. Taylor, Ana I. Terriza-Torres, Valentina Tibollo, Patric Tippmann, Carlo Torti, Enrico M. Trecarichi, Yi‐Ju Tseng, Andrew Vallejos, Gael Varoquaux, Margaret E. Vella, Jill-Jênn Vie, Michele Vitacca, Kavishwar B. Wagholikar, Lemuel R. Waitman, Demián Wassermann, Griffin M. Weber, Yuan William, Nadir Yehya, Alberto Zambelli, Harrison G. Zhang, Daniela Zoeller, Chiara Zucco, Shyam Visweswaran, Danielle L. Mowery, Zongqi Xia

Bibliographic record

VenueScientific Reports · 2021
Typearticle
Languageen
FieldMedicine
TopicLong-Term Effects of COVID-19
Canadian institutionsMcGill UniversityMontreal Neurological Institute and Hospital
FundersNorth Carolina Translational and Clinical Sciences Institute, University of North Carolina at Chapel HillU.S. National Library of MedicineNational Institute of Environmental Health SciencesNational Institute of Neurological Disorders and StrokeNational Institute of Allergy and Infectious DiseasesUniversità degli Studi di PaviaUniversity of North Carolina at Chapel HillNational Institutes of HealthNational Center for Advancing Translational SciencesUniversité Paris-SaclayNational Heart, Lung, and Blood InstituteGreat Ormond Street Hospital for ChildrenDivision of Cancer Prevention, National Cancer InstituteNational Cancer InstituteAlbert-Ludwigs-Universität FreiburgBritish Heart FoundationAssistance publique-Hôpitaux de ParisGeorgia Clinical and Translational Science Alliance
KeywordsCoronavirus disease 2019 (COVID-19)Phenotype2019-20 coronavirus outbreakSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)PandemicMedicineBetacoronavirusVirologyBiologyGeneticsInternal medicineGeneOutbreakDiseaseInfectious disease (medical specialty)

Abstract

fetched live from OpenAlex

Abstract Neurological complications worsen outcomes in COVID-19. To define the prevalence of neurological conditions among hospitalized patients with a positive SARS-CoV-2 reverse transcription polymerase chain reaction test in geographically diverse multinational populations during early pandemic, we used electronic health records (EHR) from 338 participating hospitals across 6 countries and 3 continents (January–September 2020) for a cross-sectional analysis. We assessed the frequency of International Classification of Disease code of neurological conditions by countries, healthcare systems, time before and after admission for COVID-19 and COVID-19 severity. Among 35,177 hospitalized patients with SARS-CoV-2 infection, there was an increase in the proportion with disorders of consciousness (5.8%, 95% confidence interval [CI] 3.7–7.8%, p FDR < 0.001) and unspecified disorders of the brain (8.1%, 5.7–10.5%, p FDR < 0.001) when compared to the pre-admission proportion. During hospitalization, the relative risk of disorders of consciousness (22%, 19–25%), cerebrovascular diseases (24%, 13–35%), nontraumatic intracranial hemorrhage (34%, 20–50%), encephalitis and/or myelitis (37%, 17–60%) and myopathy (72%, 67–77%) were higher for patients with severe COVID-19 when compared to those who never experienced severe COVID-19. Leveraging a multinational network to capture standardized EHR data, we highlighted the increased prevalence of central and peripheral neurological phenotypes in patients hospitalized with COVID-19, particularly among those with severe disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.015
Threshold uncertainty score0.409

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.269
Teacher spread0.259 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2021
Admission routes1
Has abstractyes

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