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Record W3208183593 · doi:10.1101/2021.10.24.465617

Quantification of breeding sites parameters in shaping bacterial communities in <i>Aedes aegypti</i> (Diptera: Culicidae)

2021· preprint· en· W3208183593 on OpenAlexaff
Josiann Normandeau-Guimond, Lyza Héry, Amandine Guidez, Audrey‐Anne Durand, Christelle Delannay, Jean Issaly, Stéphanie Raffestin, Joseph Nigro, Anubis Vega-Rúa, Philippe Constant, Claude Guertin

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2021
Typepreprint
Languageen
FieldMedicine
TopicMosquito-borne diseases and control
Canadian institutionsInstitut National de la Recherche Scientifique
FundersAgence Nationale de la Recherche
KeywordsMicrobiomeBiologyAedes aegyptiEcologyLarva

Abstract

fetched live from OpenAlex

Abstract Studies have demonstrated the importance of breeding site, few had disentangled the role of microbiome, physico-chemical and biological factors of water as well as landuse on larval microbial communities and their recruitment in mosquito. A quantitative exploration of the interplay of multiple factors on mosquito microbiome was performed using a dataset obtained through a field survey undertaken in French Guiana. Two complementary hypotheses were tested (i) the most dissimilar larval microbiome structures in breeding sites displayed the most contrasting water properties and land-use, (ii) a higher specificity level of environmental parameters have an incidence on larval microbiome. Variance partitioning approach validated the two hypothesis by providing evidence that water bacterial community is a most significant driver shaping the structure of the bacteriome in mosquito than other environmental parameters from the breeding sites. However, land-use does not play such important role to explain variance. Our results consolidate and complement the knowledge shaping mosquito microbiota but also highlighted the large unknown in understanding the ecology of the recruitment into host.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.255
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicMosquito-borne diseases and control→French-language works237,207→