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Record W3209668695 · doi:10.23977/jaip.2020.040105

Research on Entity Recognition and Knowledge Graph Construction Based on Tcm Medical Records

2021· article· en· W3209668695 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueJournal of Artificial Intelligence Practice · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBiomedical Text Mining and Ontologies
Canadian institutionsnot available
Fundersnot available
KeywordsComputer scienceKnowledge extractionAmbiguityInformation retrievalVisualizationGraphConditional random fieldArtificial intelligenceData scienceData mining

Abstract

fetched live from OpenAlex

Traditional Chinese medicine (TCM) medical records contain valuable medical information, and are important resources for personalized knowledge analysis, auxiliary diagnosis and treatment, clinical decision support, and drug to use pattern mining of famous TCM doctors. As an effective and novel knowledge management technology, knowledge graph can provide a new way for the inheritance and development of TCM. Constructing medical knowledge graph can potentially help to discover knowledge from clinical data, assist clinical decision-making and personalized treatment recommendation. However, the construction of TCM knowledge graph is still mainly based on structured data, and unstructured texts such as medical records, literature and electronic medical records urgently need to be extracted for mining and analysis. Aiming at the difficulties of word segmentation, entity variety and ambiguity in TCM medical records, this paper proposes a named entity recognition method of deep learning hybrid model based on two-way long-term memory (BILSTM) network and conditional random field (CRF); then by analyzing the process of TCM diagnosis and treatment, the core concepts of TCM are extracted and the ontology layer is constructed; finally, the knowledge graph is constructed by Neo4j, which can provide retrieval, visualization and other functions to help the learning and sharing of TCM knowledge.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.015
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.986
Threshold uncertainty score0.993

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.015
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.163
GPT teacher head0.441
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it