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Record W3211031512 · doi:10.1139/cjps-2021-0104

Characterization of bronze leaf disease in western Canadian aspen and poplar trees

2021· article· en· W3211031512 on OpenAlexafffundvenueabout
Champa Wijekoon, Melanie Kalischuk, Paige Brunelle, R. J. Howard, L. M. Kawchuk

Bibliographic record

VenueCanadian Journal of Plant Science · 2021
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversity of GuelphAgriculture and Agri-Food Canada
FundersAgriculture and Agri-Food CanadaNatural Sciences and Engineering Research Council of Canada
KeywordsBiologyBotanyPathogenWoody plantInternal transcribed spacerSporeWindbreakAscosporeFungal pathogenHorticultureRibosomal RNAGene

Abstract

fetched live from OpenAlex

Aspen and poplar trees are important horticultural plants grown in Canada for aesthetic, commercial woodlot and windbreak applications. Bronze leaf is a destructive disease in Populus spp. and is caused by the fungal pathogen Apioplagiostoma populi Barr. This pathogen is often difficult to isolate and confirm from infected plant tissues and has been mainly identified by disease symptoms and morphological characteristics of A. populi when fruiting bodies form on infected leaves or branches. Affected leaves and branches typically become necrotic and bronze in colour. Air-borne spores and nursery shipments containing infected plants play an important role in the efficient movement of the pathogen. In this study, bronze leaf disease samples from symptomatic trees in Canada were examined microscopically for A. populi perithecia and asci. Pathogen-specific genomic sequences were identified for the development of sensitive stringent diagnostics that indicated branches and petioles were the most effective tissues for detecting A. populi. Leaf samples from symptomatic trees were collected in Canada and examined for perithecia to microscopically characterize A. populi asci and ascospores. Disease associated DNA sequences of the internal transcribed spacer (ITS) 5.8S region of the nuclear ribosomal, β-tubulin 2, and translation elongation factor-1-γ chain, were isolated from perithecia and symptomatic tree samples. Morphological and molecular biological data from this study characterized the relationship and epidemiology of A. populi and enabled the development of rapid diagnostic methods that restrict the extent of further losses in amenity and commercial plantings of aspen and poplar.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.205
Threshold uncertainty score0.412

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.200
Teacher spread0.192 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2021
Admission routes4
Has abstractyes

Explore more

Same venueCanadian Journal of Plant Science→Same topicPlant Pathogens and Fungal Diseases→French-language works237,207→