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Record W3211288937 · doi:10.5281/zenodo.3757992

nipy/nibabel: 3.1.0

2020· article· en· W3211288937 on OpenAlexaff
Matthew Brett, Christopher J. Markiewicz, Michael Hanke, Marc-Alexandre Côté, Ben Cipollini, Paul J. McCarthy, Dorota Jarecka, Christopher Cheng, Yaroslav O. Halchenko, Michiel Cottaar, Satrajit Ghosh, Eric B. Larson, Demián Wassermann, Stephan Gerhard, Gregory R. Lee, Hao-Ting Wang, Erik K. Kastman, Jakub Kaczmarzyk, Roberto Guidotti, Or Duek, Ariel Rokem, Cindee Madison, Félix C. Morency, Brendan Moloney, Mathias Goncalves, Ross D. Markello, Cameron Riddell, Christopher Burns, Jarrod Millman, Alexandre Gramfort, Jaakko Leppäkangas, Anibal Sólon, Jasper J.F. van den Bosch, Robert D. Vincent, Henry Braun, Krish Subramaniam, Krzysztof J. Gorgolewski, Pradeep Reddy Raamana, B. Nolan Nichols, Eric M. Baker, Soichi Hayashi, Basile Pinsard, Christian Haselgrove, Mark Hymers, Oscar Estéban, Serge Koudoro, Nikolaas N. Oosterhof, Bago Amirbekian, Ian Nimmo‐Smith, Ly Nguyen, Samir Reddigari, Samuel St‐Jean, Egor Panfilov, Eleftherios Garyfallidis, Gaël Varoquaux, Jon Haitz Legarreta, Kevin S. Hahn, Oliver Hinds, Bennet Fauber, Jean‐Baptiste Poline, Jon Stutters, Kesshi Jordan, Matthew Cieslak, Miguel Estevan Moreno, Valentin Haenel, Yannick Schwartz, Zvi Baratz, Benjamin C Darwin, Bertrand Thirion, Dimitri Papadopoulos Orfanos, Fernando Pérez‐García, Igor Solovey, Iván González, Jath Palasubramaniam, Justin Lecher, Katrin Leinweber, Konstantinos Raktivan, Philippe Gervais, Syam Gadde, Thomas Ballinger, Thomas Roos, Venkateswara Reddy Reddam, freec

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCell Image Analysis Techniques
Canadian institutionsHospital for Sick ChildrenMcGill UniversitySickKids FoundationMontreal Neurological Institute and HospitalUniversité de SherbrookeBaycrest HospitalUbisoft (Canada)
Fundersnot available
KeywordsComputer science

Abstract

fetched live from OpenAlex

3.1.0 (Monday 20 April 2020) New feature release in the 3.1.x series. New features Conformation function (<code>processing.conform</code>) and CLI tool (<code>nib-conform</code>) to apply shape, orientation and zooms (pr/853) (Jakub Kaczmarzyk, reviewed by CM, YOH) Affine rescaling function (<code>affines.rescale_affine</code>) to update dimensions and voxel sizes (pr/853) (CM, reviewed by Jakub Kaczmarzyk) Bug fixes Delay import of h5py until neded (pr/889) (YOH, reviewed by CM) Maintenance Fix typo in documentation (pr/893) (Zvi Baratz, reviewed by CM) Tests converted from nose to pytest (pr/865 + many sub-PRs) (Dorota Jarecka, Krzyzstof Gorgolewski, Roberto Guidotti, Anibal Solon, Or Duek, CM) API changes and deprecations <code>kw_only_meth</code>/<code>kw_only_func</code> decorators are deprecated (pr/848) (RM, reviewed by CM)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.789
Threshold uncertainty score0.998

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.248
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2020
Admission routes1
Has abstractyes

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