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Record W3211668472 · doi:10.1002/sta4.437

A partial EM algorithm for model‐based clustering with highly diverse missing data patterns

2021· article· en· W3211668472 on OpenAlexaff
Ryan P. Browne, Paul D. McNicholas, Christopher J. Findlay

Bibliographic record

VenueStat · 2021
Typearticle
Languageen
FieldComputer Science
TopicBayesian Methods and Mixture Models
Canadian institutionsMcMaster UniversityUniversity of Waterloo
Fundersnot available
KeywordsMissing dataExpectation–maximization algorithmComputer scienceAlgorithmCluster analysisMixture modelConvergence (economics)ComputationDivergence (linguistics)GaussianData miningMathematicsArtificial intelligenceMachine learningStatisticsMaximum likelihood

Abstract

fetched live from OpenAlex

The expectation‐maximization (EM) algorithm for incomplete data with highly diverse missing data patterns can be computationally expensive. A partial expectation‐maximization (PEM) algorithm is developed to ease this computational burden. This PEM algorithm circumvents the need for a traditional E‐step by performing a partial E‐step that reduces the Kullback‐Leibler divergence between the conditional distribution of the missing data and the distribution of the missing data given the observed data. The PEM and EM algorithms are compared in terms of computation time and convergence on simulated data. The PEM algorithm is illustrated using a latent Gaussian mixture model to cluster a white bread sensory analysis dataset.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.016
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.006
Threshold uncertainty score0.030

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0060.016
Meta-epidemiology (narrow)0.0020.002
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0020.003
Science and technology studies0.0010.001
Scholarly communication0.0020.003
Open science0.0040.003
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.0050.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.069
GPT teacher head0.317
Teacher spread0.248 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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