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Record W3212286463 · doi:10.1093/jcag/gwab033

Crohn’s and Colitis Canada’s 2021 Impact of COVID-19 and Inflammatory Bowel Disease in Canada: COVID-19 Vaccines—Biology, Current Evidence and Recommendations

2021· article· en· W3212286463 on OpenAlexafffundabout
Sanjay K. Murthy, M Ellen Kuenzig, Joseph W. Windsor, Jean‐Eric Ghia, Anne M. Griffiths, Remo Panaccione, Cynthia H. Seow, Eric I. Benchimol, Çharles N. Bernstein, Alain Bitton, James Guoxian Huang, Jennifer Jones, Kate Lee, Gilaad G. Kaplan, Mariam S Mukhtar, Parul Tandon, Laura E. Targownik, Deanna L. Gibson

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2021
Typearticle
Languageen
FieldMedicine
TopicSARS-CoV-2 and COVID-19 Research
Canadian institutionsUniversity of British ColumbiaUniversity of CalgaryMount Sinai HospitalCrohn's and Colitis CanadaUniversity of OttawaMcGill University Health CentreInstitute for Clinical Evaluative SciencesDalhousie UniversityUniversity of TorontoOkanagan University CollegeUniversity of British Columbia, Okanagan CampusSickKids FoundationUniversity of ManitobaOttawa Hospital
FundersAbbVie CanadaCanadian Institutes of Health ResearchTakeda CanadaPfizer CanadaCrohn's and Colitis CanadaPfizer
KeywordsMedicineAzathioprineInflammatory bowel diseasePandemicImmunologyVaccinationPopulationDiseaseAdverse effectCrohn's diseaseCoronavirus disease 2019 (COVID-19)Clinical trialIntensive care medicineInternal medicineInfectious disease (medical specialty)Environmental health

Abstract

fetched live from OpenAlex

The COVID-19 pandemic has ushered a globally focused vaccine development program that produced multiple successful vaccines within a year. Four SARS-CoV-2 vaccines have been approved for use in Canada, using two different technologies, all of which have shown excellent efficacy in reducing the rate of symptomatic COVID-19 infection and 100% efficacy in preventing death from COVID-19. People with inflammatory bowel disease (IBD), like many others with immune-mediated chronic diseases, were excluded from the pivotal trials of these vaccines, leading to early hesitancy by regulatory bodies to endorse administering the vaccines to these groups. However, recent data has shown that the adverse event rate to SARS-CoV-2 vaccine among people with IBD is similar to the general population. Early data has further shown that people with IBD are capable of mounting a robust immune response to SARS-CoV-2 vaccines, particularly following a second dose, whereas the response to the first dose is blunted in those receiving anti-TNF therapy or conventional immunosuppressants (azathioprine, 6-mercaptopurine, methotrexate). Based on these data and evidence from previous vaccine programs among people with IBD, multiple national and international expert panels have recommended that individuals with IBD receive complete vaccination against SARS-CoV-2 as soon as possible.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.019
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.092
Threshold uncertainty score0.292

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.019
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0030.003
Bibliometrics0.0040.004
Science and technology studies0.0030.002
Scholarly communication0.0060.002
Open science0.0040.002
Research integrity0.0070.006
Insufficient payload (model declined to judge)0.0220.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.332
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations11
Published2021
Admission routes3
Has abstractyes

Explore more

Same venueJournal of the Canadian Association of Gastroenterology→Same topicSARS-CoV-2 and COVID-19 Research→French-language works237,207→