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Record W3216620312 · doi:10.1200/jco.21.02112

Cancer Risks Associated With <i>BRCA1</i> and <i>BRCA2</i> Pathogenic Variants

2022· article· en· W3216620312 on OpenAlexafffund

Bibliographic record

VenueJournal of Clinical Oncology · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBRCA gene mutations in cancer
Canadian institutionsMcGill UniversityLunenfeld-Tanenbaum Research InstituteUniversity of TorontoMount Sinai Hospital
FundersEuropean Social FundNational Cancer InstituteNIHR Cambridge Biomedical Research CentreNational Center for Advancing Translational SciencesMedical Research Councillékařská fakulta Univerzity KarlovyManchester Biomedical Research CentreNational Institutes of HealthKerry Group Kuok FoundationCentro de Investigación Biomédica en Red de CáncerDeutsche KrebshilfeSahlgrenska UniversitetssjukhusetUppsala UniversitetNRG OncologyMinistero dell’Istruzione, dell’Università e della RicercaCanadian Institutes of Health ResearchCancerfondenCancer AustraliaNational Breast Cancer FoundationEuropean CommissionMinisterio de Ciencia e InnovaciónKorea Health Industry Development InstituteNational Institute for Health and Care ResearchWellcome TrustCancer Research UKRoyal Marsden NHS Foundation TrustFondation ARC pour la Recherche sur le CancerGeneral Secretariat for Research and TechnologyNational Health and Medical Research CouncilInstitut National Du CancerMinistério da Ciência, Tecnologia e InovaçãoHospital de Câncer de BarretosFundación CellexAssociazione Italiana per la Ricerca sul CancroGray FoundationUniverzita Karlova v PrazeDeutsches KrebsforschungszentrumDipartimenti di EccellenzaInstituto de Salud Carlos IIIOhio State University
KeywordsCancerProstate cancerBreast cancerOvarian cancerRisk assessmentProstateGenetic variants

Abstract

fetched live from OpenAlex

PURPOSE To provide precise age-specific risk estimates of cancers other than female breast and ovarian cancers associated with pathogenic variants (PVs) in BRCA1 and BRCA2 for effective cancer risk management. METHODS We used data from 3,184 BRCA1 and 2,157 BRCA2 families in the Consortium of Investigators of Modifiers of BRCA1/2 to estimate age-specific relative (RR) and absolute risks for 22 first primary cancer types adjusting for family ascertainment. RESULTS BRCA1 PVs were associated with risks of male breast (RR = 4.30; 95% CI, 1.09 to 16.96), pancreatic (RR = 2.36; 95% CI, 1.51 to 3.68), and stomach (RR = 2.17; 95% CI, 1.25 to 3.77) cancers. Associations with colorectal and gallbladder cancers were also suggested. BRCA2 PVs were associated with risks of male breast (RR = 44.0; 95% CI, 21.3 to 90.9), stomach (RR = 3.69; 95% CI, 2.40 to 5.67), pancreatic (RR = 3.34; 95% CI, 2.21 to 5.06), and prostate (RR = 2.22; 95% CI, 1.63 to 3.03) cancers. The stomach cancer RR was higher for females than males (6.89 v 2.76; P = .04). The absolute risks to age 80 years ranged from 0.4% for male breast cancer to approximately 2.5% for pancreatic cancer for BRCA1 carriers and from approximately 2.5% for pancreatic cancer to 27% for prostate cancer for BRCA2 carriers. CONCLUSION In addition to female breast and ovarian cancers, BRCA1 and BRCA2 PVs are associated with increased risks of male breast, pancreatic, stomach, and prostate (only BRCA2 PVs) cancers, but not with the risks of other previously suggested cancers. The estimated age-specific risks will refine cancer risk management in men and women with BRCA1/2 PVs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.487
Threshold uncertainty score0.457

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.082
GPT teacher head0.423
Teacher spread0.341 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations275
Published2022
Admission routes2
Has abstractyes

Explore more

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