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Record W3216911607 · doi:10.14393/ufu.di.2021.485

Detecção de Xanthomonas campestris pv. campestris em sementes de canola tratadas e variabilidade genética de uma coleção de isolados

2021· dissertation· pt· W3216911607 on OpenAlexaboutno aff
Rayane Louise Candida Diniz

Bibliographic record

Venuenot available
Typedissertation
Languagept
FieldAgricultural and Biological Sciences
TopicPlant Pathogenic Bacteria Studies
Canadian institutionsnot available
Fundersnot available
KeywordsXanthomonas campestrisCanolaBiologyHorticulturePhysicsBotanyBacteria

Abstract

fetched live from OpenAlex

Canola (Brassica napus L. var. oleifera) is an oilseed developed in Canada from the genetic improvement of rapeseed plants, which can be used in the production of edible oil and biodiesel. Black rot caused by the bacterium Xanthomonas campestris pv. campestris (Xcc) is one of the most destructive diseases in canola, occasioning losses in production and productivity. The bacteria can survive in the seeds and the use of healthy seeds is recommended in the management of disease. The objectives of this study were to evaluate and to compare the efficiency of semi-selective culture media for the detection of Xcc; to detect the presence of the bacteria in seed-treated canolas and to culturally, biochemically and molecularly characterize 34 isolates of Xcc from various brassicas including cultivars of B. oleracea and B. napus. For evaluation of the culture media an Xcc. isolate was used in four media 523, NA, NSCAA and YDC, with and without cycloheximide fungicide with three replications in each; the efficiency of each medium was assessed from the diameter of the colonies and counting the number of colonies in CFU mL-1. The 34 Xcc isolates were characterized biochemically, physiologically and molecularly, using specific primers XCF/XCR and universal (BOX, ERIC). The 523, NA and NSCAA culture media with the addition of cyclohexamide were efficient for the detection of the bacteria in the seed extract. The isolates were culturally, biochemically and molecularly characterized and 33 were identified as Xcc. The isolates showed genetic variability by BOX and ERIC-PCR, and it was not possible to group them according to geographic region and or host of origin.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Science and technology studies, Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesMeta-epidemiology (narrow)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.634
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.240
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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