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Record W4050271

Techniques for isolating and purifying porcine aortic valve endothelial cells.

2008· article· en· W4050271 on OpenAlexaff
Wing-Yee Cheung, Edmond W. K. Young, Craig A. Simmons

Bibliographic record

VenuePubMed · 2008
Typearticle
Languageen
FieldMedicine
TopicTissue Engineering and Regenerative Medicine
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsDispaseCollagenaseDigestion (alchemy)MedicineAndrologyAortic valveMolecular biologyChromatographyBiologyEnzymeBiochemistrySurgeryChemistry
DOInot available

Abstract

fetched live from OpenAlex

BACKGROUND AND AIM OF THE STUDY: Existing methods to isolate aortic valve endothelial cells (ECs) are unreliable and often yield populations that are inadequate for long-term studies in vitro because of valve interstitial cell (IC) contamination. The study aim was to test various isolation protocols to improve the yield and purity of isolated ECs, and to assess two purification techniques to further deplete contaminating ICs and improve the quality of long-term EC cultures. METHODS: Porcine aortic valve leaflets were digested in different concentrations of collagenase and dispase over various incubation times. Isolated cells were counted, and the purities of the populations determined by immunocytochemical staining and image analysis. Improvements in purity after magnetic cell sorting (MACS) or clonal expansion were assessed. RESULTS: Enzymatic digestion using 60 U/ml collagenase yielded the largest number of cells. Digestion with 2.0 U/ml dispase and 60 U/ml collagenase produced significantly more pure populations of ECs than solutions containing 0.5 or 1.0 U/ml dispase (p <0.05). A 2-h digestion produced similar yields compared to longer digestion times. MACS improved purity (p <0.01) and was efficient and economical, but purified populations were contaminated with ICs post-confluence. Clonal expansion produced the highest quality EC cultures, with no IC contamination after weeks of post-confluent culturing. CONCLUSION: The results of these studies have provided recommendations for the improved isolation of aortic valve ECs, and guidelines for the further purification of isolated EC populations based on quality, time and economical considerations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.002
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.244
Teacher spread0.214 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2008
Admission routes1
Has abstractyes

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