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Record W4200158234 · doi:10.1111/2041-210x.13795

Accounting for a nonlinear functional response when estimating prey dynamics using predator diet data

2021· article· en· W4200158234 on OpenAlexafffundabout
Matthew Robertson, Mariano Koen‐Alonso, Paul M. Regular, Noel G. Cadigan, Fan Zhang

Bibliographic record

VenueMethods in Ecology and Evolution · 2021
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine and fisheries research
Canadian institutionsFisheries and Oceans CanadaMemorial University of Newfoundland
FundersNatural Sciences and Engineering Research Council of CanadaOcean Frontier Institute
KeywordsPredationTrophic levelFunctional responsePredatorAbundance (ecology)PopulationForage fishForageFood webEcologyPopulation cycleApex predatorBiologyEnvironmental science

Abstract

fetched live from OpenAlex

Abstract Forage fish species are key in the transfer of energy from lower to upper trophic levels in marine ecosystems. Therefore, understanding their population dynamics, including population levels, is crucial for understanding productivity and the regulation of marine food webs. However, many forage fishes are poorly sampled by bottom trawl surveys, leading to poor estimates of their abundance. These estimates can be improved by using predator stomach contents as an additional sampling strategy; however, nonlinear relationships between prey abundance and predator consumption (i.e. the functional response) may bias stomach data as well. Using predator stomach contents and bottom trawl survey data, this study aimed to minimize this bias by developing a model to estimate prey dynamics and account for the predator functional response. This model was tested using a series of simulations and applied to a case study of northern sand lance Ammodytes dubius on the Grand Bank, Newfoundland, Canada. The simulations revealed that when predators consumed prey following a nonlinear functional response, our model outperformed a classical model (the model adopted by most studies) that assumed a linear functional response. In the case study, we estimated the relative abundance of sand lance from 1995 to 2018, which exhibited oscillatory dynamics with a period of approximately 7 years. Our results demonstrate that our model is capable of more accurately estimating the abundance of data‐limited prey populations, which contributes to a better understanding of food web dynamics.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.003
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.768
Threshold uncertainty score0.556

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.079
GPT teacher head0.390
Teacher spread0.311 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations13
Published2021
Admission routes3
Has abstractyes

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