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Record W4200630926 · doi:10.1109/tmi.2022.3213983

Learn2Reg: Comprehensive Multi-Task Medical Image Registration Challenge, Dataset and Evaluation in the Era of Deep Learning

2022· preprint· en· W4200630926 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueIEEE Transactions on Medical Imaging · 2022
Typepreprint
Languageen
FieldEngineering
TopicMedical Imaging and Analysis
Canadian institutionsConcordia University
FundersStanford Bio-XGillings School of Public HealthHaute école Spécialisée de Suisse OccidentaleNanjing UniversityUniversity of North Carolina at Chapel HillNanjing University of Information Science and TechnologyInstitut Gustave-RoussyConcordia UniversityNvidiaRadboud Universitair Medisch CentrumMenzies Centre for Australian Studies, King's College London, University of LondonComputer Science and Artificial Intelligence Laboratory, Massachusetts Institute of TechnologyHong Kong University of Science and TechnologyUppsala UniversitetAthinoula A. Martinos Center for Biomedical Imaging, Massachusetts General HospitalCentre National de la Recherche ScientifiqueTel Aviv UniversityImperial College LondonCentre d'Imagerie BioMédicaleUniversität zu LübeckUniversité Paris-SaclayTsinghua UniversityChinese University of Hong KongBundesministerium für Bildung und ForschungHuazhong University of Science and TechnologyAkademia Górniczo-Hutnicza im. Stanislawa StaszicaAlan Turing InstituteWuhan National Laboratory for OptoelectronicsElektaRadboud UniversiteitVanderbilt UniversityKing's College LondonInstitut National de la Santé et de la Recherche MédicaleMassachusetts General Hospital
KeywordsLeverage (statistics)Computer scienceDeep learningArtificial intelligenceModalitiesRobustness (evolution)Image registrationGeneralityMetric (unit)Machine learningMedical imagingData scienceImage (mathematics)

Abstract

fetched live from OpenAlex

Image registration is a fundamental medical image analysis task, and a wide variety of approaches have been proposed. However, only a few studies have comprehensively compared medical image registration approaches on a wide range of clinically relevant tasks. This limits the development of registration methods, the adoption of research advances into practice, and a fair benchmark across competing approaches. The Learn2Reg challenge addresses these limitations by providing a multi-task medical image registration data set for comprehensive characterisation of deformable registration algorithms. A continuous evaluation will be possible at https://learn2reg.grand-challenge.org. Learn2Reg covers a wide range of anatomies (brain, abdomen, and thorax), modalities (ultrasound, CT, MR), availability of annotations, as well as intra- and inter-patient registration evaluation. We established an easily accessible framework for training and validation of 3D registration methods, which enabled the compilation of results of over 65 individual method submissions from more than 20 unique teams. We used a complementary set of metrics, including robustness, accuracy, plausibility, and runtime, enabling unique insight into the current state-of-the-art of medical image registration. This paper describes datasets, tasks, evaluation methods and results of the challenge, as well as results of further analysis of transferability to new datasets, the importance of label supervision, and resulting bias. While no single approach worked best across all tasks, many methodological aspects could be identified that push the performance of medical image registration to new state-of-the-art performance. Furthermore, we demystified the common belief that conventional registration methods have to be much slower than deep-learning-based methods.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.972
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.006
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.323
Teacher spread0.292 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it