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Record W4205729662 · doi:10.3934/mbe.2022116

The effect of landscape fragmentation on Turing-pattern formation

2022· article· en· W4205729662 on OpenAlexaff
Nazanin Zaker, Christina A. Cobbold, Frithjof Lutscher

Bibliographic record

VenueMathematical Biosciences & Engineering · 2022
Typearticle
Languageen
FieldMedicine
TopicMathematical and Theoretical Epidemiology and Ecology Models
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsTuringPattern formationSpatial ecologyPopulationFragmentation (computing)EcologySpatial heterogeneityStatistical physicsComputer sciencePhysicsBiology

Abstract

fetched live from OpenAlex

Diffusion-driven instability and Turing pattern formation are a well-known mechanism by which the local interaction of species, combined with random spatial movement, can generate stable patterns of population densities in the absence of spatial heterogeneity of the underlying medium. Some examples of such patterns exist in ecological interactions between predator and prey, but the conditions required for these patterns are not easily satisfied in ecological systems. At the same time, most ecological systems exist in heterogeneous landscapes, and landscape heterogeneity can affect species interactions and individual movement behavior. In this work, we explore whether and how landscape heterogeneity might facilitate Turing pattern formation in predator-prey interactions. We formulate reaction-diffusion equations for two interacting species on an infinite patchy landscape, consisting of two types of periodically alternating patches. Population dynamics and movement behavior differ between patch types, and individuals may have a preference for one of the two habitat types. We apply homogenization theory to derive an appropriately averaged model, to which we apply stability analysis for Turing patterns. We then study three scenarios in detail and find mechanisms by which diffusion-driven instabilities may arise even if the local interaction and movement rates do not indicate it.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.250
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2022
Admission routes1
Has abstractyes

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