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Record W4205916785 · doi:10.1017/cjn.2021.443

P.167 Application of the Anatomical Fiducials Framework to a Clinical Dataset of Patients with Parkinson’s Disease

2021· article· en· W4205916785 on OpenAlexvenueno aff
M Abbass, G Gilmore, R Chevalier, M Jach, TM Peters, AR Khan, JC Lau

Bibliographic record

VenueCanadian Journal of Neurological Sciences / Journal Canadien des Sciences Neurologiques · 2021
Typearticle
Languageen
FieldEngineering
TopicMedical Imaging and Analysis
Canadian institutionsnot available
Fundersnot available
KeywordsFiducial markerBonferroni correctionPairwise comparisonMedicineWilcoxon signed-rank testArtificial intelligenceMagnetic resonance imagingPattern recognition (psychology)Computer scienceNuclear medicineRadiologyMathematicsStatisticsInternal medicineMann–Whitney U test

Abstract

fetched live from OpenAlex

Background: Establishing spatial correspondence between subject and template images is necessary in neuroimaging research and clinical applications. A point-based set of anatomical fiducials (AFIDs) was recently developed and validated to provide quantitative measures of image registration. We applied the AFIDs protocol to magnetic resonance images (MRIs) obtained from patients with Parkinson’s Disease (PD). Methods: Two expert and three novice raters placed AFIDs on MRIs of 39 PD patients. Localization and registration errors were calculated. To investigate for unique morphometric features, pairwise distances between AFIDs were calculated and compared to 30 controls who previously had AFIDs placed. Wilcoxon rank-sum tests with Bonferroni corrections were used. Results: 6240 AFIDs were placed with a mean localization error (±SD) of 1.57mm±1.16mm and mean registration error of 3.34mm±1.94mm. Out of the 496 pairwise distances, 40 were statistically significant (p<0.05/496). PD patients had a decreased pairwise distance between the left temporal horn, brainstem and pineal gland. Conclusions: AFIDs can be successfully applied with millimetric accuracy in a clinical setting and utilized to provide localized and quantitative measures of registration error. AFIDs provide clinicians and researchers with a common, open framework for quality control and validation of spatial correspondence, facilitating accurate aggregation of imaging datasets and comparisons between various neurological conditions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.004
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.004
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0010.003
Scholarly communication0.0000.000
Open science0.0020.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.282
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes1
Has abstractyes

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