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Record W4205962506 · doi:10.1002/alz.054899

Clinical relevance of three‐range cutpoints in Alzheimer’s disease CSF biomarkers

2021· article· en· W4205962506 on OpenAlexaff
Wagner S. Brum, Marco Antônio De Bastiani, Joseph Therriault, Andrei Bieger, João Pedro Ferrari‐Souza, Andréa Lessa Benedet, Tharick A. Pascoal, Paramita Saha‐Chaudhuri, Pedro Rosa‐Neto, Eduardo R. Zimmer

Bibliographic record

VenueAlzheimer s & Dementia · 2021
Typearticle
Languageen
FieldMedicine
TopicDementia and Cognitive Impairment Research
Canadian institutionsMcGill University
Fundersnot available
KeywordsBiomarkerMedicineOncologyCognitive impairmentInternal medicinePsychologyDiseaseBiology

Abstract

fetched live from OpenAlex

Abstract Background Alzheimer’s disease (AD) was biologically defined by the 2018 NIA‐AA Research Framework (RF), which recommends dichotomously categorizing biomarker status as normal or abnormal using single cutpoints. Nevertheless, the RF also states a three‐range approach might be useful in AD research. However, this potentially relevant strategy remains mostly unexplored in the field. We hereby propose a three‐range cutpoint system to interpret CSF biomarker measurements. We hypothesized the intermediate group would have a different cognitive trajectory than negative/positive groups and that three‐range models would prognostically outperform binary models. Method We included 1278 non‐demented individuals (CU: n=575; MCI: n=703) from the ADNI with baseline CSF Elecsys® biomarkers. 20% of these individuals (who had baseline [18F]AV45 Aβ‐PET) were randomly allocated to a “training set” to define three‐range cutpoints – which were later evaluated in a “test set” comprising the remainder 80% participants. Three‐range cutpoints were defined with two‐graph receiver operating characteristics (TGROC) for each CSF biomarker (Aβ1‐42, p‐tau, t‐tau, p‐tau/Aβ1‐42, t‐tau/Aβ1‐42). Cutpoints were generated with 100,000 bootstraps, combining conventional or earlier‐centiloid [18F]AV45 thresholds to cognition in five different schemes for each biomarker. Linear mixed‐effects models (LMM) were employed to choose the best three‐range scheme and also to main analyses. The primary outcome of LMMs was the mPACC composite and participants were followed for up to 6 years. Three‐range models were compared within themselves, to binary and to continuous models based on AIC, BIC, log‐likelihood and R2. Result LMMs indicated all three‐range approaches outperformed models with binarized or linear‐continuous form of biomarkers and, interestingly, were closer in information metrics to more sophisticate spline‐continuous models, with p‐tau/Aβ1‐42 being the best three‐range predictor (Table 1). For the latter model (Figure 1), slope‐contrast analyses indicated the intermediate group had a faster rate of decline than the negative (β‐estimate: 2.04, t=4.88, p= 3.5x10‐6) but slower than the positive group (β‐estimate: 4.68, t=10.4, p=1x10‐14). Conclusion Our findings demonstrate that the proposed three‐range system for interpreting CSF biomarkers in AD prognostically outperforms binary cutpoints for all evaluated biomarkers, supporting the existence of an intermediate zone beyond the current normal/abnormal paradigm. This approach has clear potential applications to clinical trial recruitment and to clinical practice.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.022
metaresearch head score (Gemma)0.067
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.022
Threshold uncertainty score0.118

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0220.067
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.065
GPT teacher head0.371
Teacher spread0.307 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2021
Admission routes1
Has abstractyes

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