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Detecting Cardiac Abnormalities with Multi-Lead ECG Signals: A Modular Network Approach

2021· article· en· W4206360847 on OpenAlexaff
Ryan Clark, Mohammadreza Heydarian, Kashif Siddiqui, Sajjad Rashidiani, Md Asif Khan, Thomas E. Doyle

Bibliographic record

Venue2021 Computing in Cardiology (CinC) · 2021
Typearticle
Languageen
FieldMedicine
TopicECG Monitoring and Analysis
Canadian institutionsVector InstituteMcMaster University
Fundersnot available
KeywordsModular designComputer scienceFlexibility (engineering)Feature extractionDeep learningArtificial intelligenceFeature (linguistics)Test setPattern recognition (psychology)Lead (geology)Set (abstract data type)Data mining

Abstract

fetched live from OpenAlex

Globally, heart disease has been the leading cause of death for more than two decades. There is a need to develop intelligent architectures to handle a variety of real life clinical scenarios when a 12-lead ECG is not a viable option. We propose a method using wide and deep CNN architectures to classify cardiac abnormalities from 12, 6, 4, 3, and 2 leads ECGs. These five networks were created for the PhysioNet/CinC Challenge 2021, by the Biomedic2ai team. ECG signals were down-sampled to 100Hz and partitioned with 5-second windows using a sliding 4-second overlap. A one-dimensional deep CNN (1D-dCNN) module was used to preserve sequentially related features embedded in the signals. A feature extraction module was added to the 1D-dCNN, creating a ‘wide and deep modular network’. This framework allows the addition or removal of modules to optimize classification models. We achieved test scores of 0.36, 0.30, 0.31, 0.29, and 0.34 (ranked 23rd, 26th, 26th, 27th, and 22nd out of 39 officially ranked teams) for 12,6,4,3, and 2 leads, respectively, on the hidden test set provided by the challenge. Our model demonstrates potential with the wide modular network. The framework also provides the flexibility to integrate clinical knowledge in the future modules to improve the overall classification performance.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.004
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.269
Teacher spread0.244 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2021
Admission routes1
Has abstractyes

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