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Record W4206666853 · doi:10.3389/fmars.2021.635922

argoFloats: An R Package for Analyzing Argo Data

2021· article· en· W4206666853 on OpenAlexafffund
Dan Kelley, Jaimie Harbin, Clark Richards

Bibliographic record

VenueFrontiers in Marine Science · 2021
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicOceanographic and Atmospheric Processes
Canadian institutionsBedford Institute of OceanographyFisheries and Oceans CanadaDalhousie University
FundersFisheries and Oceans CanadaNatural Sciences and Engineering Research Council of Canada
KeywordsArgoUploadComputer scienceR packageVariety (cybernetics)DatabaseData scienceData miningWorld Wide WebArtificial intelligence

Abstract

fetched live from OpenAlex

An R package named argoFloats has been developed to facilitate identifying, downloading, caching, and analyzing oceanographic data collected by Argo profiling floats. The analysis phase benefits from close connections between argoFloats and the oce package, which is likely to be familiar to those who already use R for the analysis of oceanographic data of other kinds. This paper outlines how to use argoFloats to accomplish some everyday tasks that are particular to Argo data, ranging from downloading data and finding subsets to handling quality control and producing a variety of diagnostic plots. The benefits of the R environment are sketched in the examples, and also in some notes on the future of the argoFloats package.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.024
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: none
Teacher disagreement score0.080
Threshold uncertainty score0.267

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.024
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0020.002
Science and technology studies0.0010.001
Scholarly communication0.0030.002
Open science0.0020.003
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0800.065

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.248
Teacher spread0.228 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2021
Admission routes2
Has abstractyes

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