Reply by Authors
Bibliographic record
Abstract
No AccessJournal of UrologyAdult Urology1 Nov 2021Reply by Authorsis a reply to letterEditorial Comment Lauren Folgosa Cooley, Adaeze A. Emeka, Travis J. Meyers, Phillip R. Cooper, Daniel W. Lin, Antonio Finelli, James A. Eastham, Christopher J. Logothetis, Leonard S. Marks, Danny Vesprini, S. Larry Goldenberg, Celestia S. Higano, Christian P. Pavlovich, June M. Chan, Todd M. Morgan, Eric A. Klein, Daniel A. Barocas, Stacy Loeb, Brian T. Helfand, Denise M. Scholtens, John S. Witte, and William J. Catalona Lauren Folgosa CooleyLauren Folgosa Cooley Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois These authors contributed equally to the first authorship. More articles by this author , Adaeze A. EmekaAdaeze A. Emeka Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois These authors contributed equally to the first authorship. More articles by this author , Travis J. MeyersTravis J. Meyers Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California These authors contributed equally to the first authorship. More articles by this author , Phillip R. CooperPhillip R. Cooper Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois More articles by this author , Daniel W. LinDaniel W. Lin Fred Hutchinson Cancer Research Center, Cancer Prevention Program, Public Health Sciences, Seattle, Washington Department of Urology, University of Washington, Seattle, Washington More articles by this author , Antonio FinelliAntonio Finelli Division of Urology, Department of Surgery, Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada More articles by this author , James A. EasthamJames A. Eastham Urology Service, Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York More articles by this author , Christopher J. LogothetisChristopher J. Logothetis Departments of Genitourinary Medical Oncology and Urology, the University of Texas M. D. Anderson Cancer Center, Houston, Texas More articles by this author , Leonard S. MarksLeonard S. Marks Department of Urology, David Geffen School of Medicine at UCLA, Los Angeles, California More articles by this author , Danny VespriniDanny Vesprini Odette Cancer Centre, Sunnybrook Health and Sciences Centre, University of Toronto, Toronto, Ontario, Canada More articles by this author , S. Larry GoldenbergS. Larry Goldenberg Department of Urologic Sciences, University of British Columbia, Vancouver, British Columbia, Canada More articles by this author , Celestia S. HiganoCelestia S. Higano Department of Urologic Sciences, University of British Columbia, Vancouver, British Columbia, Canada More articles by this author , Christian P. PavlovichChristian P. Pavlovich The Brady Urological Institute, the Johns Hopkins University School of Medicine, Baltimore, Maryland More articles by this author , June M. ChanJune M. Chan Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California Department of Urology, University of California, San Francisco, San Francisco, California More articles by this author , Todd M. MorganTodd M. Morgan Department of Urology, University of Michigan, Ann Arbor, Michigan More articles by this author , Eric A. KleinEric A. Klein Glickman Urological and Kidney Institute, Cleveland Clinic Lerner College of Medicine, Cleveland Clinic, Cleveland, Ohio More articles by this author , Daniel A. BarocasDaniel A. Barocas Department of Urology, Vanderbilt University Medical Center, Nashville, Tennessee More articles by this author , Stacy LoebStacy Loeb Departments of Urology and Population Health, New York University Langone Health and Manhattan Veterans Affairs Medical Center, New York, New York More articles by this author , Brian T. HelfandBrian T. Helfand Division of Urology, NorthShore University Health System, Evanston, Illinois These authors contributed equally to the senior authorship. More articles by this author , Denise M. ScholtensDenise M. Scholtens Division of Biostatistics, Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois These authors contributed equally to the senior authorship. More articles by this author , John S. WitteJohn S. Witte Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California Department of Urology, University of California, San Francisco, San Francisco, California Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California These authors contributed equally to the senior authorship. More articles by this author , and William J. CatalonaWilliam J. Catalona ‡Correspondence:Northwestern University Feinberg School of Medicine, 676 N. St. Clair St., Suite 20-150, Chicago, Illinois 60611 telephone: 312-695-4471; E-mail Address: [email protected] Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois These authors contributed equally to the senior authorship. More articles by this author View All Author Informationhttps://doi.org/10.1097/JU.0000000000001937.02AboutFull TextPDF ToolsAdd to favoritesDownload CitationsTrack CitationsPermissionsReprints ShareFacebookLinked InTwitterEmail "Reply by Authors." The Journal of Urology, 206(5), p. 1156 © 2021 by American Urological Association Education and Research, Inc.FiguresReferencesRelatedDetailsRelated articlesJournal of UrologySep 10, 2021, 12:00:00 AMEditorial Comment Volume 206Issue 5November 2021Page: 1156-1156 Advertisement Copyright & Permissions© 2021 by American Urological Association Education and Research, Inc.MetricsAuthor Information Lauren Folgosa Cooley Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois These authors contributed equally to the first authorship. More articles by this author Adaeze A. Emeka Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois These authors contributed equally to the first authorship. More articles by this author Travis J. Meyers Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California These authors contributed equally to the first authorship. More articles by this author Phillip R. Cooper Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois More articles by this author Daniel W. Lin Fred Hutchinson Cancer Research Center, Cancer Prevention Program, Public Health Sciences, Seattle, Washington Department of Urology, University of Washington, Seattle, Washington More articles by this author Antonio Finelli Division of Urology, Department of Surgery, Princess Margaret Cancer Centre, University Health Network, Toronto, Ontario, Canada More articles by this author James A. Eastham Urology Service, Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York More articles by this author Christopher J. Logothetis Departments of Genitourinary Medical Oncology and Urology, the University of Texas M. D. Anderson Cancer Center, Houston, Texas More articles by this author Leonard S. Marks Department of Urology, David Geffen School of Medicine at UCLA, Los Angeles, California More articles by this author Danny Vesprini Odette Cancer Centre, Sunnybrook Health and Sciences Centre, University of Toronto, Toronto, Ontario, Canada More articles by this author S. Larry Goldenberg Department of Urologic Sciences, University of British Columbia, Vancouver, British Columbia, Canada More articles by this author Celestia S. Higano Department of Urologic Sciences, University of British Columbia, Vancouver, British Columbia, Canada More articles by this author Christian P. Pavlovich The Brady Urological Institute, the Johns Hopkins University School of Medicine, Baltimore, Maryland More articles by this author June M. Chan Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California Department of Urology, University of California, San Francisco, San Francisco, California More articles by this author Todd M. Morgan Department of Urology, University of Michigan, Ann Arbor, Michigan More articles by this author Eric A. Klein Glickman Urological and Kidney Institute, Cleveland Clinic Lerner College of Medicine, Cleveland Clinic, Cleveland, Ohio More articles by this author Daniel A. Barocas Department of Urology, Vanderbilt University Medical Center, Nashville, Tennessee More articles by this author Stacy Loeb Departments of Urology and Population Health, New York University Langone Health and Manhattan Veterans Affairs Medical Center, New York, New York More articles by this author Brian T. Helfand Division of Urology, NorthShore University Health System, Evanston, Illinois These authors contributed equally to the senior authorship. More articles by this author Denise M. Scholtens Division of Biostatistics, Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois These authors contributed equally to the senior authorship. More articles by this author John S. Witte Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California Department of Urology, University of California, San Francisco, San Francisco, California Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California These authors contributed equally to the senior authorship. More articles by this author William J. Catalona Department of Urology, Northwestern University Feinberg School of Medicine, Chicago, Illinois ‡Correspondence:Northwestern University Feinberg School of Medicine, 676 N. St. Clair St., Suite 20-150, Chicago, Illinois 60611 telephone: 312-695-4471; E-mail Address: [email protected] These authors contributed equally to the senior authorship. More articles by this author Expand All Advertisement PDF DownloadLoading ...
Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.
How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.003 | 0.045 |
| Meta-epidemiology (narrow) | 0.001 | 0.001 |
| Meta-epidemiology (broad) | 0.001 | 0.002 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.003 | 0.002 |
| Scholarly communication | 0.004 | 0.005 |
| Open science | 0.002 | 0.003 |
| Research integrity | 0.019 | 0.020 |
| Insufficient payload (model declined to judge) | 0.102 | 0.081 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".