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Record W4211075124 · doi:10.1002/9781119378341.ch3

Glycosylation

2018· other· en· W4211075124 on OpenAlexaff
Maureen Spearman, Erika Lattová, Hélène Perreault, Michael Butler

Bibliographic record

Venuenot available
Typeother
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGlycosylation and Glycoproteins Research
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsGlycosylationGlycanGlycoproteinChemistryBiochemistryEndoplasmic reticulumRecombinant DNAMonoclonal antibodyN-linked glycosylationAntibodyBiologyGene

Abstract

fetched live from OpenAlex

Glycosylation is the most prevalent form of posttranslational modification of recombinant glycoproteins. N-linked glycans are added to protein as a co-translational modification in the endoplasmic reticulum (ER). Recombinant proteins may also contain O-linked glycans attached through an N-acetylgalactosamine residue that are structurally different than N-linked glycans, but include many of the same monosaccharides and linkages. A very important example of how structure is important in function is the glycosylation of monoclonal antibodies (IgG). Modification of glycan structure can also be accomplished through the addition of glycoprotein-processing inhibitors to the culture media during production. The development and refinement of glycan structural analysis has been a key asset in defining the relationship between glycoprotein structure and function of biopharmaceuticals. Fluorophore-assisted Carbohydrate Electrophoresis (FACE) is an older method that separates and quantifies glycans based on their size using high-density gels. Quantitative analysis of glycosylation by mass spectrometry has also made considerable advances in recent years.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.040
Threshold uncertainty score0.135

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0010.000
Scholarly communication0.0030.001
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0400.044

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.284
Teacher spread0.273 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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