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Record W4211176196 · doi:10.1002/ajmg.a.62673

Phenotypic spectrum of the recurrent <i>TRPM3</i> p.(<scp>Val837Met</scp>) substitution in seven individuals with global developmental delay and hypotonia

2022· article· en· W4211176196 on OpenAlexaff
Matthew A. Lines, Paula Goldenberg, Ashley Wong, Siddharth Srivastava, Hanne Hove, Helena Gásdal Karstensen, Kwame Anyane‐Yeboa, Jun Liao, Nan Jiang, Alison S. May, Edwin R. Guzman, Manuela Morleo, Stefano D’Arrigo, Claudia Ciaccio, Chiara Pantaleoni, Raffaele Castello, Shane McKee, Jinfon Ong, Hana Zibdeh-Lough, Frédéric Tran Mau‐Them, Anna Gerasimenko, Delphine Héron, Boris Keren, Henri Margot, Jean‐Madeleine de Sainte Agathe, Lydie Bürglen, Thomas Voets, Joris Vriens, A. Micheil Innes, David A. Dyment

Bibliographic record

VenueAmerican Journal of Medical Genetics Part A · 2022
Typearticle
Languageen
FieldNursing
TopicMagnesium in Health and Disease
Canadian institutionsChildren's Hospital of Eastern OntarioUniversity of OttawaAlberta Children's HospitalUniversity of Calgary
FundersNovo Nordisk FondenFondazione Telethon
KeywordsHypotoniaPhenotypeSubstitution (logic)MedicinePediatricsGeneticsBiologyComputer scienceGene

Abstract

fetched live from OpenAlex

TRPM3 encodes a transient receptor potential cation channel of the melastatin family, expressed in the central nervous system and in peripheral sensory neurons of the dorsal root ganglia. The recurrent substitution in TRPM3: c.2509G>A, p.(Val837Met) has been associated with syndromic intellectual disability and seizures. In this report, we present the clinical and molecular features of seven previously unreported individuals, identified by exome sequencing, with the recurrent p.(Val837Met) variant and global developmental delay. Other shared clinical features included congenital hypotonia, dysmorphic facial features (broad forehead, deep-set eyes, and down turned mouth), exotropia, and musculoskeletal issues (hip dysplasia, hip dislocation, scoliosis). Seizures were observed in two of seven individuals (febrile seizure in one and generalized tonic-clonic seizures with atonic drops in another), and epileptiform activity was observed in an additional two individuals. This report extends the number of affected individuals to 16 who are heterozygous for the de novo recurrent substitution p.(Val837Met). In contrast with the initial report, epilepsy was not a mandatory feature observed in this series. TRPM3 pathogenic variation should be considered in individuals with global developmental delays, moderate-severe intellectual disability with, or without, childhood-onset epilepsy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.081
Threshold uncertainty score0.439

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.264
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2022
Admission routes1
Has abstractyes

Explore more

Same venueAmerican Journal of Medical Genetics Part ASame topicMagnesium in Health and DiseaseFrench-language works237,207