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Record W4211188431 · doi:10.1007/s13225-020-00463-5

Freshwater Dothideomycetes

2020· article· en· W4211188431 on OpenAlexaff
Wei Dong, Bin Wang, Kevin D. Hyde, Eric H. C. McKenzie, Huzefa A. Raja, Kazuaki Tanaka, Mohamed A. Abdel‐Wahab, Faten A. Abdel-Aziz, Mingkwan Doilom, Rungtiwa Phookamsak, Sinang Hongsanan, Dhanushka N. Wanasinghe, Xian-Dong Yu, Gen-Nuo Wang, Hao Yang, Jing Yang, Kasun M. Thambugala, Qing Tian, Zong-Long Luo, Jianbo Yang, Andrew N. Miller, Jacques Fournier, Saranyaphat Boonmee, Dian-Ming Hu, Sarunya Nalumpang, Huang Zhang

Bibliographic record

VenueFungal Diversity · 2020
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsUniversity of British Columbia
FundersSichuan Province Science and Technology Support ProgramNational Natural Science Foundation of China
KeywordsBiologyDothideomycetesHyphomycetesBotanyCypriniformesZoologyEcologyPhylogeneticsCyprinidaeFishery

Abstract

fetched live from OpenAlex

Abstract Freshwater Dothideomycetes are a highly diverse group of fungi, which are mostly saprobic in freshwater habitats worldwide. They are important decomposers of submerged woody debris and leaves in water. In this paper, we outline the genera of freshwater Dothideomycetes with notes and keys to species. Based on multigene analyses and morphology, we introduce nine new genera, viz . Aquimassariosphaeria , Aquatospora , Aquihelicascus , Fusiformiseptata , Neohelicascus , Neojahnula , Pseudojahnula , Purpureofaciens , Submersispora ; 33 new species, viz . Acrocalymma bipolare , Aquimassariosphaeria kunmingensis , Aquatospora cylindrica , Aquihelicascus songkhlaensis , A. yunnanensis , Ascagilis submersa , A. thailandensis , Bambusicola aquatica , Caryospora submersa , Dictyocheirospora thailandica , Fusiformiseptata crocea , Helicosporium thailandense , Hongkongmyces aquaticus , Lentistoma aquaticum , Lentithecium kunmingense , Lindgomyces aquaticus , Longipedicellata aquatica , Neohelicascus submersus , Neohelicomyces dehongensis , N. thailandicus , Neohelicosporium submersum , Nigrograna aquatica , Occultibambusa kunmingensis , Parabambusicola aquatica , Pseudoasteromassaria aquatica , Pseudoastrosphaeriella aquatica , Pseudoxylomyces aquaticus , Purpureofaciens aquatica , Roussoella aquatica , Shrungabeeja aquatica , Submersispora variabilis , Tetraploa puzheheiensis , T. yunnanensis ; 16 new combinations, viz. Aquimassariosphaeria typhicola , Aquihelicascus thalassioideus , Ascagilis guttulaspora , A. queenslandica , A. seychellensis , A. sunyatsenii , Ernakulamia xishuangbannaensis , Neohelicascus aquaticus , N. chiangraiensis , N. egyptiacus , N. elaterascus , N. gallicus , N. unilocularis , N. uniseptatus , Neojahnula australiensis , Pseudojahnula potamophila ; 17 new geographical and habitat records, viz. Aliquandostipite khaoyaiensis , Aquastroma magniostiolata , Caryospora aquatica , C. quercus , Dendryphiella vinosa , Ernakulamia cochinensis , Fissuroma neoaggregatum , Helicotruncatum palmigenum , Jahnula rostrata , Neoroussoella bambusae , N. leucaenae , Occultibambusa pustula , Paramonodictys solitarius , Pleopunctum pseudoellipsoideum , Pseudocapulatispora longiappendiculata , Seriascoma didymosporum , Shrungabeeja vadirajensis and ten new collections from China and Thailand, viz. Amniculicola guttulata , Aquaphila albicans , Berkleasmium latisporum , Clohesyomyces aquaticus , Dictyocheirospora rotunda , Flabellascoma fusiforme , Pseudoastrosphaeriella bambusae , Pseudoxylomyces elegans , Tubeufia aquatica and T. cylindrothecia . Dendryphiella phitsanulokensis and Tubeufia roseohelicospora are synonymized with D. vinosa and T. tectonae , respectively. Six orders, 43 families and 145 genera which belong to freshwater Dothideomycetes are reviewed. Of these, 46 genera occur exclusively in freshwater habitats. A world map illustrates the distribution of freshwater Dothideomycetes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.018

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.002
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.200
Teacher spread0.181 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations191
Published2020
Admission routes1
Has abstractyes

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