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Record W4213412879 · doi:10.1093/cid/ciac159

Delayed Mortality Among Solid Organ Transplant Recipients Hospitalized for COVID-19

2022· article· en· W4213412879 on OpenAlexfundno aff
Madeleine R. Heldman, Olivia S. Kates, Kassem Safa, Camille N. Kotton, Ashrit Multani, Sarah J. Georgia, Julie M. Steinbrink, Barbara D. Alexander, Emily A. Blumberg, Brandy Haydel, Vagish Hemmige, Marion Hemmersbach‐Miller, Ricardo M. La Hoz, Lisset Moni, Yesabeli Condor, Sandra Flores, C. Muñoz, Juan Guitierrez, Esther I. Diaz, Daniela Diaz, Rodrigo Vianna, Giselle Guerra, Matthias Loebe, Julie M. Yabu, Kailey Hughes Kramer, Sajal D. Tanna, Michael G. Ison, Robert M. Rakita, Maricar Malinis, Marwan M. Azar, Margaret McCort, Pooja Singh, Arzu Velioğlu, Sameer Mehta, David van Duin, Jason D. Goldman, Erika D. Lease, Anna Wald, Ajit P. Limaye, Cynthia E. Fisher, Behdad Besharatian, M. Crespo, Rade Tomic, Sameep Sehgal, Dana Weisshaar, Reda E. Girgis, Joanna Nelson, William M. Bennett, Afrah S. Sait, A. Rumore, Peter West, Amy Jeng, Valida Bajrovic, Erin P Bilgili, Tracy Anderson-Haag, Abbas Badami, Jesús Álvarez‐García, Lyndsey Bowman-Anger, Carlos Ortiz‐Bautista, Rachel Friedman-Morocco, Kiran Gajurel, Lizbeth Cahuayme‐Zuniga, Mark R. Wakefield, Monica Fung, Nicole Theodoropoulos, Sally T Chuang, Srividya Bhandaram, Massimiliano Veroux, Bhavna Chopra, Diana F. Florescu, Danielle Witteck, Daniela Díaz, Kathryn Ripley, Kapil Saharia, Sanjeev Akkina, Todd P McCarty, A.K. Webb, Akanksha Arya, Giridhar Vedula, J.M. El-Amm, M. Katherine Dokus, Arun Narayanan, Priscila Cilene León Bueno de Camargo, Rosemary Ouseph, Andrew Breuckner, Alfred Luk, Avinash Aujayeb, Daniel Ganger, D.S. Keith, Federica Meloni, Ghady Haidar, Lori Zapernick, Megan K. Morales, Nitender Goyal, Tanvi Sharma, Uma Malhotra, Alexander Kuo, Ana Rossi, Angelina Edwards, Brian C. Keller, Christy Beneri, Darby Derringer, Edward A. Dominguez, Elise Carlson, Faris Hashim, Haris Murad, Heinrike Wilkens, Henry Neumann, Imran Gani, Joseph Kahwaji, Joyce Popoola, Marian G. Michaels, Niyati Jakharia, Oveimar De La Cruz, Alfredo Puing, Reza Motallebzadeh, Ravi Kanth Velagapudi, Rajan Kapoor, Sridhar R. Allam, Fernanda P. Silveira, Surabhi B Vora, Uttam Reddy, Vikas R. Dharnidharka, Hani M. Wadei, Lominadze Zurabi

Bibliographic record

VenueClinical Infectious Diseases · 2022
Typearticle
Languageen
FieldMedicine
TopicCOVID-19 Clinical Research Studies
Canadian institutionsnot available
FundersNational Heart, Lung, and Blood InstituteNational Institutes of HealthNational Center for Advancing Translational SciencesAmplyxNational Institute of Allergy and Infectious DiseasesInstitute of Translational Health SciencesCidara TherapeuticsBeiGeneRegeneron PharmaceuticalsCanadian Society of TransplantationUniversity of Washington
KeywordsMedicineCoronavirus disease 2019 (COVID-19)2019-20 coronavirus outbreakSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Organ transplantationBetacoronavirusIntensive care medicineMEDLINEInternal medicineTransplantationVirologyInfectious disease (medical specialty)OutbreakDisease

Abstract

fetched live from OpenAlex

INTRODUCTION: Most studies of solid organ transplant (SOT) recipients with COVID-19 focus on outcomes within one month of illness onset. Delayed mortality in SOT recipients hospitalized for COVID-19 has not been fully examined. METHODS: We used data from a multicenter registry to calculate mortality by 90 days following initial SARS-CoV-2 detection in SOT recipients hospitalized for COVID-19 and developed multivariable Cox proportional-hazards models to compare risk factors for death by days 28 and 90. RESULTS: Vital status at day 90 was available for 936 of 1117 (84%) SOT recipients hospitalized for COVID-19: 190 of 936 (20%) died by 28 days and an additional 56 of 246 deaths (23%) occurred between days 29 and 90. Factors associated with mortality by day 90 included: age > 65 years [aHR 1.8 (1.3-2.4), p =<0.001], lung transplant (vs. non-lung transplant) [aHR 1.5 (1.0-2.3), p=0.05], heart failure [aHR 1.9 (1.2-2.9), p=0.006], chronic lung disease [aHR 2.3 (1.5-3.6), p<0.001] and body mass index ≥ 30 kg/m 2 [aHR 1.5 (1.1-2.0), p=0.02]. These associations were similar for mortality by day 28. Compared to diagnosis during early 2020 (March 1-June 19, 2020), diagnosis during late 2020 (June 20-December 31, 2020) was associated with lower mortality by day 28 [aHR 0.7 (0.5-1.0, p=0.04] but not by day 90 [aHR 0.9 (0.7-1.3), p=0.61]. CONCLUSIONS: In SOT recipients hospitalized for COVID-19, >20% of deaths occurred between 28 and 90 days following SARS-CoV-2 diagnosis. Future investigations should consider extending follow-up duration to 90 days for more complete mortality assessment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.090
GPT teacher head0.492
Teacher spread0.402 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2022
Admission routes1
Has abstractyes

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